Gene PHATRDRAFT_49146 details

Gene Information

• Locus tag: PHATRDRAFT_49146
• ID: 7195614
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: +
• Start bp: 56294
• End bp: 58864
• Gene Length: 2571 bp
• Protein Length: 856 aa
• GC content: 54%
• Product: predicted protein
• Protein accession: XP_002183802
• Protein GI: 219127146

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATCGT CGGTATCCGG CAAACTGAAA GTCTTGTTGT TTGGCACGGT GGGGGACGAA 
ACGGACGCCT TGATCGAGAA AGTGGCAGCC CTGCACGGCA GCAAGGCGGG ACCCTTTGAC 
GCTGCCTTTT GTGTAGGACC CGTGAACGTA GCCCGTCTGC TCCAAAACGA ACGGACTCTG 
ACCATTCCCA CCTATCTGCA AGACGATTCG TTACGTGAGG AACCAAACCC GTCCTCACCA 
AAATCTGATT GGAACCACAA CGCTCCGGAA GACTGCAACC AAAATTTCGT ACCACTCGCT 
GAGAATCTGT ATTTATTGCG CACTCCAGAG CACCCTGCCG CCGCCAATGT GTGGAGTCTA 
TCAGTGGCGC CCCGCAAACC CGCCCTGGTA GTAGTTGCGT GTCCCGCACG CTTCCGCGTC 
GACCAAACCA CCGTCGCCCA ACCCTTGCTC GATCAACTCC GTCACGTTTC CTATACCGGA 
TGCGACTTGT TGCTGACTAC AGAAGCTCCG CAAGGCATGG AATCAATTAT TGGCTCGGAA 
TCCGTAACAC CGTCGTTTCC AACGCCCGGA TCGGCCCTCG CCGTCTCCTA CGACGTGGCC 
GAAGTCGCCT TGTTGGCACG GGCCCGTTAC CACGTGGTGC CATCCCCCAA CGGACTCTTT 
CAACAATCAC CCGCCTTTGC CCATTTGTCC GCCACGACCC ATACCACCAA TACCCTTCAT 
GTGGGTCGCG TCCTGACGCT CGGACCGGTA CAGCCCGTGA CGGACTGGAA AATCGCCCCC 
AAAACTCACA AATTCGTTCA CGCCCTGGGA CTACAACCCC TCCACCAACA ATCGATTACG 
GAGCAGCAAG GTCAACGACC CGCACACGTT TTGACCAATC CCTTCACCGA CACTGCCTAT 
CAAAGGGATG GTCCTCCCAG CACGAACGGT GGCCACAATA GCGGACTTTC GGAAGCCAGT 
GCGCGCCGCA TTCTGGCGGA AGAACAGCAC AAACGATCCG GCGGAGATCC GTCCCAACGA 
TGGAGTAGTA CAGGTCCCCA CCGTCCCAAA CGATCGAGGG AAAACGACTA CCAGGAACAG 
AACGTCGACC TAACATGTCG TACGCTCTTT TTGCACGGCC TGCACAAGGA CGTATCCGGA 
CAATTGCAAA GCGCCACTGG CGGGGATCAG GTACTACTGC AAGCATTGGC TAGCTTCGGA 
GCCGAGCAAA TTCGACGACC GCCGCAAGCC ACGACCAGCA GTTTTTGTTT TTGTGAATTT 
GGAACACACG ACCAAGCTCT CCAATGCCTG CAAACCCTGG GCGGAAGTTT GACCGTCCAC 
GGTGTGCTCC TCACCGTCAA GTGGGCCACC ACTGTGAACG CGGCCACCGG CCCGGATGGA 
TCCAATCCGA AACGTCAACG TCTCACCGAA CCCGAAGCCC GTGAATCGTC GACTATACAC 
TATAAGCTAC CCCCACAGAT GCTGAACGGT CCGAATTCTC CTTCTCACGA AACCGTCGCC 
GAAACCCTAC GGACCTGGAT GGAGCATACG TTGGAATACG CTTTGGCGTC AGAAGATGAC 
ACGGACCACG CCACACCCAC CGTCCAGGCC GCGGACGAAC CCGCTTTGCA AGTCCAAAAG 
CGCCTACCGT CCGACGAAGC CATGACGTTT GGGTTTTTGG ATTTTGCCTC GCACGCTGCG 
GCCAGTATGG CTTTGGCGAC ATTAACGGGC AGTACGGATG GAGGTCGAGT GACAATGGAG 
AATGCCAAAC GCGTTCCCGA GGTATTCAAA TCGCTGTGGG GCGGGAGTGC GGCGGATACG 
CAGCCGTTGT ATTTGAACTG GGCGCGCCCG AAGGAAGCGG ACGTGCACAA TATTATTGAA 
GATGCTTCCG GTTTTAAATT TGAGCGTCGC CATTTCCCTG CCGATGCACG AAAGGATTGC 
TGGTTTTGCT TAGCCAGTGA AGCTTGTGAA AAACATTTAA TTACGGGAGT GTATCAAAGT 
TGCTACGCGG CAATGCCCAA AGGTCCAGTG CATCAAGGGC ACGTTTTGTT GATTCCGGTG 
AAACACAGCA GTCAAGGAGC ATTGAAAGAT TCAATCGTTG CCCAAGAAAT GGATGCACTC 
AAGTCAAAAC TAAGAAAACA CGCATACAGT GTCTACGATA GCGATTTATT TGTGTTTGAA 
CGCGCCATTC AGACAAAGGG CGGTTATCAT ACCCATGTGC AGTGTGTTCC GGTTCCCAAA 
AGGTCGGGTA TTCAGCTGCA GTCCACCATG ATTGCCCAAG CGCGAAAGAC CGGAATGCAA 
TTGCGCGAAC TTACCTCCGA TCTCGCGCTC GCGGCCATGT TTACCGATGA GGATAACGAA 
GGGGGCTACT TTTATGCGGA AATACCGCTG GCGGGAACGG ATTTCAAGCG CTTTCTATAC 
AAAGCGGACG GTCAGGGACA GACTCCACTA CAATTTGGCC GGGAAGTTAT CGCAGCTGTC 
CTGGGTAAAC CCAGCCTAGC ACATTGGAAG TCCTGTCTGC TAGACAGAGA AGAAGAGACT 
GCAATGGCAT CATTGTTCCG TGAATCTTTT GAAAAGTTCT GTTTAGATTA G 

 

Protein sequence

MASSVSGKLK VLLFGTVGDE TDALIEKVAA LHGSKAGPFD AAFCVGPVNV ARLLQNERTL 
TIPTYLQDDS LREEPNPSSP KSDWNHNAPE DCNQNFVPLA ENLYLLRTPE HPAAANVWSL 
SVAPRKPALV VVACPARFRV DQTTVAQPLL DQLRHVSYTG CDLLLTTEAP QGMESIIGSE 
SVTPSFPTPG SALAVSYDVA EVALLARARY HVVPSPNGLF QQSPAFAHLS ATTHTTNTLH 
VGRVLTLGPV QPVTDWKIAP KTHKFVHALG LQPLHQQSIT EQQGQRPAHV LTNPFTDTAY 
QRDGPPSTNG GHNSGLSEAS ARRILAEEQH KRSGGDPSQR WSSTGPHRPK RSRENDYQEQ 
NVDLTCRTLF LHGLHKDVSG QLQSATGGDQ VLLQALASFG AEQIRRPPQA TTSSFCFCEF 
GTHDQALQCL QTLGGSLTVH GVLLTVKWAT TVNAATGPDG SNPKRQRLTE PEARESSTIH 
YKLPPQMLNG PNSPSHETVA ETLRTWMEHT LEYALASEDD TDHATPTVQA ADEPALQVQK 
RLPSDEAMTF GFLDFASHAA ASMALATLTG STDGGRVTME NAKRVPEVFK SLWGGSAADT 
QPLYLNWARP KEADVHNIIE DASGFKFERR HFPADARKDC WFCLASEACE KHLITGVYQS 
CYAAMPKGPV HQGHVLLIPV KHSSQGALKD SIVAQEMDAL KSKLRKHAYS VYDSDLFVFE 
RAIQTKGGYH THVQCVPVPK RSGIQLQSTM IAQARKTGMQ LRELTSDLAL AAMFTDEDNE 
GGYFYAEIPL AGTDFKRFLY KADGQGQTPL QFGREVIAAV LGKPSLAHWK SCLLDREEET 
AMASLFRESF EKFCLD