Gene PHATRDRAFT_49145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_49145 
Symbol 
ID7195647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp54513 
End bp55671 
Gene Length1159 bp 
Protein Length312 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183921 
Protein GI219127394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CAAACTCGGA TCGGCTGTGA GAACTAACGG TAGAACGCTC ACTGTCAGCG ATTGCAACTA 
ATAAGGAAGA GTCCTTTTAC CCTCTCTCGT TACTCCGCCG GGTCGTACCT TCCTTGAAAG
GCACCGTAAT CCCTGCTTCG ATTCCTGCCT ACCTTCTCTG CTGGCTTCGT CGTTCGTCCC
TTCCTTGGTG CGCACTGACT GGCTCCGAGT CCCTGGGAAT ATGCCACAAT CTACGATTCC
GTCGGCACCG TCCCGCAGGT CGGCCTCGTC CACGTACGAT CCGGCGCTCG TCCAAGCCTT
GTTTGAACAA GCCTACCATT TGCCGGGCAA TGACACGGCC TTTCAAGATT GGCTCGCCTA
CATGGGTAAC AATCATCCAA TATTGGGGTT GTGTCTGGCT CATCCGGCGC ACCCCGCGAC
CCGCGCCACA CGTCTACTCA TGCTACTCGC TTCGGTTACC TTTGGTCTCG TCATTACCAA
CATCTTTTAC TTGACCTGGA TCTACTACGA AGAAGATTAC GAAGTTGAAC TCTTGGCACT
CAATACCACT ACCGGTGTAC AACTTGTCGA CAATACCTAC GGGTCCGTAC AGGTCACCAC
CGGTATGTTG ATCCTATGGT TCATTGGTGG GATGGTGCAC GGTGTCTTTG ATCATGTTCT
GTGGTGCATG GCCACGGGTA TATTCCCCTG CAGTGGCTTT CCAAACGTGG CCAAACGGAG
TAATAACAAC AACAACAACA GCAACCATAC AAAAGGCCGC GAACGCAATT GGACTCTGTA
CATCATGATT GTCATTGTCA TGGTCTCCAC AGCCATTGCC ACACTCGGTG TCGTTTTAAA
TTCCGCTATG AACGCCGAAG ACCGCATCGA CGACGTGGCT CAACGGGCCC CGGCGGAAAC
CCTCAACTCG GTGGACGGCG CCGAAGTGGG CGAATTCATG CTAGGGTTCG CGTTGGAACT
CGTCATGGCC TACGTTCTGT ACTTTCCACT CGGGGAGACC ATCCTCTTTA CCGGCATTCT
CAGCTGCAAT GGGCGTCTGG CCATGTTTGC GGGTCGACCG CAAGAGATAG AACAACTCCG
CGAACAGCAA CGTCCGCAAG CCAAAACGAA ATCGCTCCAA ACCGAATCCC GCATCCAATC
CAAACAGTCC GCAGTGTAA
 
Protein sequence
MPQSTIPSAP SRRSASSTYD PALVQALFEQ AYHLPGNDTA FQDWLAYMGN NHPILGLCLA 
HPAHPATRAT RLLMLLASVT FGLVITNIFY LTWIYYEEDY EVELLALNTT TGVQLVDNTY
GSVQVTTGML ILWFIGGMVH GVFDHVLWCM ATGIFPCSGF PNVAKRSNNN NNNSNHTKGR
ERNWTLYIMI VIVMVSTAIA TLGVVLNSAM NAEDRIDDVA QRAPAETLNS VDGAEVGEFM
LGFALELVMA YVLYFPLGET ILFTGILSCN GRLAMFAGRP QEIEQLREQQ RPQAKTKSLQ
TESRIQSKQS AV