| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49141 |
|---|
| Symbol | |
|---|
| ID | 7195609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011689 |
|---|
| Strand | - |
|---|
| Start bp | 40730 |
|---|
| End bp | 41736 |
|---|
| Gene Length | 1007 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183917 |
|---|
| Protein GI | 219127385 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTACAACTGC CCCGGTCACT TATAATTTGC ACTCCATGAA TACAATCTAC CAAAAAATGA
TCATCACCCG TCGTCTTGTT GCCAGTGTTG GTGGAGTCTT GGCCGTGGTT GCCTTAATGG
CTGCTAGTTG CAGCTACGGA AAGGTAAGTC CTCCGCCGAA GCAAATGGGG TGGTTACCGG
AGCACTGTTT ACTAGAATCC GTGTGTTTCT TTGTTTTCTC TTTCGCACCT ACCAGGTTAC
CCTTGGAATC AACAGTAACG CTCAGGAGCA CAGACTCACA TCCAATCATG TCCAAAGTCT
CCGATCGGGC GCGGCTTCCA CCGTTCGAGA TCTCGGCCGG AGTTCCATTA AGGGGAGAGG
ACAAGTGAAG GGTCGTGCCT CTTTACAGTC ACACAATACT CATGGATCCT CCCCCGGTGC
ACAGTCATCG TCATCCACCT CACAGACTTC GTATGGAGGG TTCCAGATCA GTTCCTCTAG
TAGCGGTCCC AACAGCATTG TTGACGGAAT AACGTTCAGT ACGTTTGGTA CGGAAAACTC
ACGAAACACC ACCGCTGACG ATACGCTTGG CTCGAGCGGT GGAAGCAACG GCAGTTACGG
CGGCTTTAAC GGAACTTTTG AAGGCTCGGC GGAATCGATT GCCGTGGAGA CTGTAAGCGC
GGAACCCAAC GCCACCGTGC CCAGAGACGG GTACGTCGAT GTTGAAGCAG GAGGCTCAAT
GGATGCGTAT GCGACCGCCA AGGGTAACGC AAGCTCATAC TCAGCAGCTG CTGGGCTCGG
AATCTCCGGA CTGTACGGAG AAGTCAATGA TGGCGATCTG AGAGCCAACG CGGAAGGTCT
AGAGTTTCTG TCGGCGTACG CCACCAGTGT ACCTAACGAA ACCGTCGATA TCGTCAATGG
TGACTCGAGC AGTTTTGTTT ACAGCGACAC GGCGGGACGA GCAAACGATT TTCTTCCCTA
ACAAAGCAGA ACTGATGACT AAAAATAGTT TTCAAACTTG ATAATCG
|
|---|
| Protein sequence | MNTIYQKMII TRRLVASVGG VLAVVALMAA SCSYGKVTLG INSNAQEHRL TSNHVQSLRS
GAASTVRDLG RSSIKGRGQV KGRASLQSHN THGSSPGAQS SSSTSQTSYG GFQISSSSSG
PNSIVDGITF STFGTENSRN TTADDTLGSS GGSNGSYGGF NGTFEGSAES IAVETVSAEP
NATVPRDGYV DVEAGGSMDA YATAKGNASS YSAAAGLGIS GLYGEVNDGD LRANAEGLEF
LSAYATSVPN ETVDIVNGDS SSFVYSDTAG RANDFLP
|
|---|
| |