Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_49141 |
Symbol | |
ID | 7195609 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 40730 |
End bp | 41736 |
Gene Length | 1007 bp |
Protein Length | 277 aa |
Translation table | |
GC content | 52% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183917 |
Protein GI | 219127385 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTACAACTGC CCCGGTCACT TATAATTTGC ACTCCATGAA TACAATCTAC CAAAAAATGA TCATCACCCG TCGTCTTGTT GCCAGTGTTG GTGGAGTCTT GGCCGTGGTT GCCTTAATGG CTGCTAGTTG CAGCTACGGA AAGGTAAGTC CTCCGCCGAA GCAAATGGGG TGGTTACCGG AGCACTGTTT ACTAGAATCC GTGTGTTTCT TTGTTTTCTC TTTCGCACCT ACCAGGTTAC CCTTGGAATC AACAGTAACG CTCAGGAGCA CAGACTCACA TCCAATCATG TCCAAAGTCT CCGATCGGGC GCGGCTTCCA CCGTTCGAGA TCTCGGCCGG AGTTCCATTA AGGGGAGAGG ACAAGTGAAG GGTCGTGCCT CTTTACAGTC ACACAATACT CATGGATCCT CCCCCGGTGC ACAGTCATCG TCATCCACCT CACAGACTTC GTATGGAGGG TTCCAGATCA GTTCCTCTAG TAGCGGTCCC AACAGCATTG TTGACGGAAT AACGTTCAGT ACGTTTGGTA CGGAAAACTC ACGAAACACC ACCGCTGACG ATACGCTTGG CTCGAGCGGT GGAAGCAACG GCAGTTACGG CGGCTTTAAC GGAACTTTTG AAGGCTCGGC GGAATCGATT GCCGTGGAGA CTGTAAGCGC GGAACCCAAC GCCACCGTGC CCAGAGACGG GTACGTCGAT GTTGAAGCAG GAGGCTCAAT GGATGCGTAT GCGACCGCCA AGGGTAACGC AAGCTCATAC TCAGCAGCTG CTGGGCTCGG AATCTCCGGA CTGTACGGAG AAGTCAATGA TGGCGATCTG AGAGCCAACG CGGAAGGTCT AGAGTTTCTG TCGGCGTACG CCACCAGTGT ACCTAACGAA ACCGTCGATA TCGTCAATGG TGACTCGAGC AGTTTTGTTT ACAGCGACAC GGCGGGACGA GCAAACGATT TTCTTCCCTA ACAAAGCAGA ACTGATGACT AAAAATAGTT TTCAAACTTG ATAATCG
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Protein sequence | MNTIYQKMII TRRLVASVGG VLAVVALMAA SCSYGKVTLG INSNAQEHRL TSNHVQSLRS GAASTVRDLG RSSIKGRGQV KGRASLQSHN THGSSPGAQS SSSTSQTSYG GFQISSSSSG PNSIVDGITF STFGTENSRN TTADDTLGSS GGSNGSYGGF NGTFEGSAES IAVETVSAEP NATVPRDGYV DVEAGGSMDA YATAKGNASS YSAAAGLGIS GLYGEVNDGD LRANAEGLEF LSAYATSVPN ETVDIVNGDS SSFVYSDTAG RANDFLP
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