Gene PHATRDRAFT_49134 details

Gene Information

• Locus tag: PHATRDRAFT_49134
• ID: 7195606
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: -
• Start bp: 14232
• End bp: 20604
• Gene Length: 6373 bp
• Protein Length: 2097 aa
• GC content: 49%
• Product: predicted protein
• Protein accession: XP_002183914
• Protein GI: 219127379

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCAAAA CATCGTTGAA ACAAACGGGA GCCGTTCCGT TGCCCAACGA TGGTCCCATC 
CACTTTGTTT GGCAGCAAAG ACACAAGACT ACCGGGGTAG ATGATTCCGT CTCTAGCGAC 
GTGCACGAAG CTGTTGCATT TCTGCGCTCG GTGGCGACGC CAACGAGTAC CGCGGAGTCT 
CGTTCGCCGA CTTTCCGTGC CATCGACAGC ACCAGTTTGA GTTGTCTCGT ACACGACTTG 
TGGTGTTTGA ACGATATTCG CGAGCAGTGT CAACGACTGC GTGTCTTTCG GAGTCATGTG 
CTCCAAGCCC GTCAGAAACA AAGCAGTGAC GCGGGTGTTG TTATCGCCAC GCTGGATACC 
CGGACTGCCA AAGCATCGCA TCGCGTTTTG TTGGAATGGT CCTTGGCAGT CGCTACACCC 
GTACCTTTGC GTCGCGCCGT ACACGCGCAT TTGCGGGAGC GTACCGGTTT GTCGGACGAC 
GCAACGTTGG ACATTGCCGG TGCCGTGTTG GATTCCATCC TGTCGAGCTC GTCACAATCA 
ACGTCTGGGC CGTCGTTGTG GTGGTGGAAA GATCCCATTG CAACCTTGCA AGAGTGGATC 
GCCTTTATGT CCTCCGACCC TTCTTTAGCG GTGGACTGGA ACGAAACACG TCCACGTATA 
CTGGTGTTTC TCCTCACCTA TGCCGATACT TGCAGTATGC CCACTCTTGG GCGTTTCGCC 
TATACGTCAC CCTCCACTGA AATGGTGGAT CAACAGTCGC AGGTCGCCAT TGCGGAAGCC 
GTCCGCGTCG CGGATTTATT TAAGGCTTTA CTCCAACCTG GCGACCGAAA TTGCTACTGG 
GAGACACGAG ACGAACCCTT TCTGGAACAA ATGCGGGACT TTTTGTGGGC TCTGCTTTCC 
TGTCGAGCCG TTTCCGAGCC TTCGTTGCAA ATTATCGGCA TTGCGTACGG ACGGGTTTGT 
GTATGGCCCT ACCATACGAA TACGCATACG AACACTTCCG AAAGTGTGGA CCCGGACGCG 
TTGGTAGCCA AGCTGCAAAA AGATTGGTCA CGGCTACCAG AGTTGTCGGA TTTGGCGCGC 
GCCGTTGTCG TTCAAGGGTT GGCAGCGACC CTTCCCGACC AGACACTATT TGCGCACAGG 
CATGAGGACA TGGAGACGCC CATTGATATG TCCACACTTA TGGATACTTT CGGTGATTTG 
GCCACCGGAG CGATCGATCC GGATGTACGG TTGGCTGCTT TGAAAGGTTT TCGCACGTTG 
ACGAGTCGCA GTCTAACCGC TCTCGCTGTA GACAATTCAG ACTCTGATAG GTTGGCAACA 
CGAAATTTGA GCTTCGCGTT GGCCCAACAA TCTCTCAAAG TTGTCATGCA GGCGTGGGAA 
AGCCCTCCCA CCCGTCGACT CGCCAACGCT ATTCCGCCCC TCTTTGACAG TGTCGTCAAC 
TTGCTGCGTC GACTGGATCA AGATTGGTCG GTTGACGCAT TGGTTGGGCG TGTACTGTCC 
CAACCTGCTC ATTGTAAAGG GCGCTATATA GCGCTGGAAG CACTCTTGCC AATCTCCGGC 
GCTCAAGCCT TGGTGTTCAC TGCGAGCCGC CCCGCCAACA AACACAGTAT GCTAGACGAT 
TTGCTCTCCG GCATTGGGGA CCACGGGCAC AATACGAATG CTATTGCTGA TTTGTGGGCC 
CGTATCCTTC AGCAATATTT GCAAGAACTT TTGCTTCAGA ACGGAATACC GACTTTATCT 
TCTTCATCCC AGAGCCAACG TACCAAAGGG GCACCGGCAG TGGCAACCGT TATGGAGAAC 
ATGGAAACGT TGCCGTCGGT TCTGACGGCT TGGTGTGATG CCTGGGTACC GAGCTTGACA 
GAGGCCCTCC TCGTACCTGA AGTCAGTCGA CGCAAGCAAA TAGCTTCGTT CTGTTTACCT 
CGGGTTTTAA AGATGGCTGG CAACGCTCGT CCTCGAGCCT CATTGGCCAT TGTCCAAATA 
CTACAACACC TGAACGCAAC CGGTCAGAAT CATTCAACTC GACTGAACAA ACCATCAAAA 
GAACGTGAAA CGAAGAAAGA CCGCGTTTCG TGGGCCATGT TGGAAGTGGT TCGACTAGCA 
GCGGTTGACC AGTTGTTGAG AGAAAAGCCT GTGGGTAGCA CCTTGGCACT AGATACGTGC 
GTAGCGTCAC TTATATCCAA AAAGTGTCTC CAATCGGCGT TGGTGCATTT CTCGCCCTTT 
GTTCGTCTCG TTGCCTTTCA AGCCATGCCG CATGTAGTGA AAGCAACCAG CTCGTTCAAG 
GACGACGCAT CACGACTTGG GCATGAAGTA TTTTTGTGGA AAGCCACGTT ACCCTTTGTG 
GTCAAAACGA GCGACAAAGA GTACGCATTG ACTTTAGTAC AGTGCTTACT TTCTTTTATG 
GATCGCTTGT CTTCTTGGGA AGCAAAATGT GTGTTATCCG ATGATCCGAA CGCCCCGCAA 
TCAACAGAAA ATTCGCAGCT ACAAGTTTCA TCCTTTGCCA TTGACTTTTT GATCAACGAT 
GTTCTTCTAC AAAAACTTAC GTATCCGGGA TCAGTTGTCG ACAAAGAGTG CTTGGCTCTC 
TCATTGTTTG AAGCGTTAAT TGTCTTTTCA TGTCGAGATC TCAAGTTTGC TCAAGAATGT 
CGGCTACTAC CTAAAGCCGG TGCTGCCTTC CACCGAAAGA GAAATTTTGC GGAGGAGGCT 
GTATGTGGTC GGATACGGCG AGCTCTCTTT GGTTTTGAGG GTCTTGCCGC TTTGTTCTCG 
ATGCTGAGCT CCAATTGGGA TGGCATACGA GACGATGCTT ACACCATTCT TAACAGTGCG 
CTCGCCTTGA CTACTAGATT TCACCTCTTC GTCCCAATGG AGTTCACCTC CAACAAAGCT 
CGCTCAAAGT TTGAAGCTCG CGCCTTATTT TTGGCCTCCT CTCCGAGACA GCGCGAGGCG 
GACGCCGGTG CTAGAATCTT AGCATTTCTC TTTGTTTCAT CGCTCACGAA CGACCAGAGG 
TATGACTATC TCGAGCGTTT GGGCTCAATT CTTCAAGAAA GGTTGACTCT AATGAAAGTA 
AAACTACAGG ACATTCTGTC AAATGATACC GACTTTGTCG ACGGCGCTGA GTTGCCCTTG 
GCCCACGGCA TTATCCGAAG CATTCGGCTG ATCTACGAAC ATCATCAAAC ACTTACCGAC 
ACTCTGCAGA ATGAGCATGA TCGATTGGGC ACTTTGTTCC AAAACATGAT ACCAATGTTT 
TGCAAAGCTC TGCAATTGTC ACTAGGCGTT GTAGCTGATC TCCGGGATGG CGAAGCTGTG 
GATGGGATGG ATCGTGAACT TGAATTTGCA TCAAGCAAAG TAAACCCTGG AGCTATTGGA 
GCCAACGGGA TTTTCTCGTC AGTTCAACGC CTGAGCAAAA CAGAGCACTC GAGACGATTG 
GCATCGCAGC GAATTGTGAT TGGTTCTTGG TTATTGACCA AGGAAACCTG CGCAGCCGTA 
TCGATATTGT TGTCGTTAGG ATGTGTCAAT CCAAGCAAGG AGAGCATGCA GCAGGTAGGA 
ATGCTCCTGA TATCAACCCT TACCTCATTG AAACACACAG GAGCTGCGTT TGCCGCCCAC 
AAAGCTCTTC AACAAATTTC TGTGGCTTGT TTTTCAATCC CAAACCTCGA GACTCTTCCT 
AAAGAGTGGG CGTTACGACT GTTAGATGAG CTAGCAAACT CCGATAAAAT ACGCGACTCG 
ACTTTGCGGC GAAGCACCGG ATACGGGCTT GGATTTTTAT CCATAATGCG ATCAGAAGTT 
GCGTGTCACT CTGCAAATCA CTCTCTGTGC TCTTTCATTA TGAAGAAAAT ATTGTGCCTT 
TCACTTCCTT CAAAAAGCAT GCTGTCGTCA TTCCTTTCGT CGATTGCTTG GTTTGATAGA 
GAAAGGCCAA TACCGCTTCC TTTCAGTCTC GGGGATGAGG TGGACGGTAT TGGATTATGT 
AATCAGTATA CGCTTCGATC GCGAGTCCAT GCGCTAAATG TATTGCGATC GATACTGTCG 
GACGCGCCTT TAGCGAAACA AGTCTTTCCA GCCGTCGGCG ATTCTATTGT ACGTGGCTTG 
TAGACCCAGC TCTCTTGTTT GCTGCATTTG CTCAGTTTTC CTGCGTTACA CTTTTACGGT 
TTTGCAGGTG ACAGCAATGA TGGGATATTC TGATACGGAT TGGTCTGTTC GAAACTCTTC 
CACGATGGTT TTCGCGGCTG TCATGCTCCG TGCAGTAGAT GCGGACAAAA ACGCATCCAA 
CGAAGATGAG ACAAGTAGTA GAGCTATCAC ACTAGCGGAG CTCTTTCGTG TTTTTCCATC 
TCTACCGGAT TTCCTAGTGT CTGTTTTGCA GGCAAGTATT GCAGGGGAAT TGGGCGAGGC 
GTCGACTTCT CCTCCCGTTC TTCCTATTCT TTTGCTTCTG GCCCGCTCTC AGCAATTGTC 
AATGTCGGGT CACGACTCCG TCTCGATTGC TGAACCTTTC ATGCAAGTTG TGTTTCGCTG 
TCTTGGTCAT GCTCACTTAA GTACCCGGGA GGCGGCCGCT CGGGCTATCG CAAACCTGTC 
CTCGGCAGAG AAGAAATCGG TCACATCTTT CCATTGTATT CTTCAGACTT GTAACGATCG 
CCTGAAAGTC AATTTACGGA CGATGGTATG GAATGACCTA CACGGGACGC TGCTCTGTAT 
TCGTGACATG TTGGCGCTTT GGAAGCTTAT TGTGAAAGAA AGTCTTGGGA AAGAGTTGCT 
TGCGTGGTTG TGGCGTTTTA CGAGGGTAGA AAACAGTCAG TTTGTTGTGC CTCCCCTATG 
TGTATCGGTT GCCCTAGAAA TTTTGCACAG AGCTAACCTT ACGGACATTG AGTCCCCCCA 
GTTGCTGCGT GCCTGTCTCG ACATTGAAAG CAAATTGGCA CGTGAGAGGC ACCATACAAG 
GGGTGACACA GGTCTATCCA AACTGGGTCT GACCGCAGGC TCAATAGCCT GCTCTGTCGT 
ATCAGAGCAG CTATGGCACT TTTCCGCCAA ATGTAGAGTA CAAGTTGACG AAAGCGTTTT 
CTCGAAGGTT GAGACTCTTC TTCGAAGTGA CTGCCCAGAC GTGAAGCTAG CGAGCGTCAA 
AGTCTTCAAG AAGTCAATAT ACCGTGGCTT AGACTCAATG CTGAAATCGT CTGATGCTCA 
TGAATGCTCA ACGTTTCTTA GCAGATTGAC GACAACAATT TTAAATGCAC TGAAAGCAGA 
GCTCGGAATC GGTAGCTCAA AAGCAGAGAA GATCTTTATT CATCCACCAA CTGTTCGTCG 
ACTCTCCCGG TGCCTTTTGG AAAGCTTTGA CGCCTATGAT GCTTTGGCAA TGGAAGTCCC 
ATCAACTGTT GCTTGCTCAG TCCTATGTGG AATAGGAGAA AGTCTCCTTA AACTTGGGGG 
TTTAGAAGCC AATCAAAATT GGAAGTTGAT TGATGTTACG CAACTAGCAG GGAATGGCAT 
TGAGCTGCTT TCGCGATGTA CACTCTTTAA TGATTCGTAT GAAGATGGAT TTCCGTTCCA 
AGGTGTGATT GGATTTTTGT GCGATCACAG ACTACCATGG CGCCTCCGAT ACTCTGCCAT 
CACCGCGATA GGAACGCTTT CTACGAATTT GACGTATCCC CCAGATTTAT GTTCAAAGTG 
GACGTCTGCC TCGTTGGAGT ACCTACAGGA CGAAGATCCA GACGTCCGTT ACGCTGCTTC 
CAAAACATTA GTATCGCCAA TCAACTCAAA TGTCCAAATT GCAGATGTTG CTTTGAACGT 
TCTTTTTACA GGAAAAAGCA ACTCTCGTAT TTTTCTACCG TGGCTCGAGA GATGTATTGA 
AAAAGTTCTG GAGAACTATT CGAAAATGAA TCGCCGTGTT TGCATGCTCG CGAACGAGTT 
GACGCAAAGC GGGATCAAAT CAGGAGAGAT ACTGAACGTT GGGAATGTGC GCGAAATCTT 
CGAAGAGGAA AATCCCAACT CGTATGGCGA ACATTTGCTT TTCGTTCAGC TTGCGGTTCG 
CGGCACATTG CAAGCGACTG TAGGTACTGT TGGACTCAAT CGAGGGATCA TTGACAAAAT 
TTTAGCATGT TGCAGTCATA TGCTTTCGCA GCTGCTCCTT CATTACACCC AGCTTCCGGA 
TTTGGACATT CTTCATGATC CCAGCCGATC CAGCGATATA TTCCCCGAGC TCCATGCCAT 
CTTTCTCCTA TCTGCCACCG TATTGACGTT CGGTGTTTTG CAAGAGTCGT CGGACATAGT 
CCAAAAAGCC AATTACTTTG CGCAGCATTC TTCGGTTGCG CGTTTGCAAC ACGCGTCGCG 
GGCCTTGGCG CAAGCAAACA ACAGCGAAGT TTCGAGACGG CAAATCTGTT CATGCTGCTT 
CTTGCTTTCG TAA 

 

Protein sequence

MGKTSLKQTG AVPLPNDGPI HFVWQQRHKT TGVDDSVSSD VHEAVAFLRS VATPTSTAES 
RSPTFRAIDS TSLSCLVHDL WCLNDIREQC QRLRVFRSHV LQARQKQSSD AGVVIATLDT 
RTAKASHRVL LEWSLAVATP VPLRRAVHAH LRERTGLSDD ATLDIAGAVL DSILSSSSQS 
TSGPSLWWWK DPIATLQEWI AFMSSDPSLA VDWNETRPRI LVFLLTYADT CSMPTLGRFA 
YTSPSTEMVD QQSQVAIAEA VRVADLFKAL LQPGDRNCYW ETRDEPFLEQ MRDFLWALLS 
CRAVSEPSLQ IIGIAYGRVC VWPYHTNTHT NTSESVDPDA LVAKLQKDWS RLPELSDLAR 
AVVVQGLAAT LPDQTLFAHR HEDMETPIDM STLMDTFGDL ATGAIDPDVR LAALKGFRTL 
TSRSLTALAV DNSDSDRLAT RNLSFALAQQ SLKVVMQAWE SPPTRRLANA IPPLFDSVVN 
LLRRLDQDWS VDALVGRVLS QPAHCKGRYI ALEALLPISG AQALVFTASR PANKHSMLDD 
LLSGIGDHGH NTNAIADLWA RILQQYLQEL LLQNGIPTLS SSSQSQRTKG APAVATVMEN 
METLPSVLTA WCDAWVPSLT EALLVPEVSR RKQIASFCLP RVLKMAGNAR PRASLAIVQI 
LQHLNATGQN HSTRLNKPSK ERETKKDRVS WAMLEVVRLA AVDQLLREKP VGSTLALDTC 
VASLISKKCL QSALVHFSPF VRLVAFQAMP HVVKATSSFK DDASRLGHEV FLWKATLPFV 
VKTSDKEYAL TLVQCLLSFM DRLSSWEAKC VLSDDPNAPQ STENSQLQVS SFAIDFLIND 
VLLQKLTYPG SVVDKECLAL SLFEALIVFS CRDLKFAQEC RLLPKAGAAF HRKRNFAEEA 
VCGRIRRALF GFEGLAALFS MLSSNWDGIR DDAYTILNSA LALTTRFHLF VPMEFTSNKA 
RSKFEARALF LASSPRQREA DAGARILAFL FVSSLTNDQR YDYLERLGSI LQERLTLMKV 
KLQDILSNDT DFVDGAELPL AHGIIRSIRL IYEHHQTLTD TLQNEHDRLG TLFQNMIPMF 
CKALQLSLGV VADLRDGEAV DGMDRELEFA SSKVNPGAIG ANGIFSSVQR LSKTEHSRRL 
ASQRIVIGSW LLTKETCAAV SILLSLGCVN PSKESMQQVG MLLISTLTSL KHTGAAFAAH 
KALQQISVAC FSIPNLETLP KEWALRLLDE LANSDKIRDS TLRRSTGYGL GFLSIMRSEV 
ACHSANHSLC SFIMKKILCL SLPSKSMLSS FLSSIAWFDR ERPIPLPFSL GDEVDGIGLC 
NQYTLRSRVH ALNVLRSILS DAPLAKQVFP AVGDSIVTAM MGYSDTDWSV RNSSTMVFAA 
VMLRAVDADK NASNEDETSS RAITLAELFR VFPSLPDFLV SVLQASIAGE LGEASTSPPV 
LPILLLLARS QQLSMSGHDS VSIAEPFMQV VFRCLGHAHL STREAAARAI ANLSSAEKKS 
VTSFHCILQT CNDRLKVNLR TMVWNDLHGT LLCIRDMLAL WKLIVKESLG KELLAWLWRF 
TRVENSQFVV PPLCVSVALE ILHRANLTDI ESPQLLRACL DIESKLARER HHTRGDTGLS 
KLGLTAGSIA CSVVSEQLWH FSAKCRVQVD ESVFSKVETL LRSDCPDVKL ASVKVFKKSI 
YRGLDSMLKS SDAHECSTFL SRLTTTILNA LKAELGIGSS KAEKIFIHPP TVRRLSRCLL 
ESFDAYDALA MEVPSTVACS VLCGIGESLL KLGGLEANQN WKLIDVTQLA GNGIELLSRC 
TLFNDSYEDG FPFQGVIGFL CDHRLPWRLR YSAITAIGTL STNLTYPPDL CSKWTSASLE 
YLQDEDPDVR YAASKTLVSP INSNVQIADV ALNVLFTGKS NSRIFLPWLE RCIEKVLENY 
SKMNRRVCML ANELTQSGIK SGEILNVGNV REIFEEENPN SYGEHLLFVQ LAVRGTLQAT 
VGTVGLNRGI IDKILACCSH MLSQLLLHYT QLPDLDILHD PSRSSDIFPE LHAIFLLSAT 
VLTFGVLQES SDIVQKANYF AQHSSVARLQ HASRALAQAN NSEVSRRQIC SCCFLLS