Gene PHATRDRAFT_49133 details

Gene Information

• Locus tag: PHATRDRAFT_49133
• ID: 7195605
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: -
• Start bp: 10636
• End bp: 12873
• Gene Length: 2238 bp
• Protein Length: 590 aa
• GC content: 51%
• Product: predicted protein
• Protein accession: XP_002183913
• Protein GI: 219127377

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCAAC ACCAGCTTGC CCGAACAACA GCGTGGTTGC TGACTATCTG TCTCATCCTA 
CTCGTAGTAG TTGCTCAAGA AGATGTTCAC CCTGACGTAG TTGCCGTTCT CGATGTTGCC 
GGGGGTCTAC GACCGAAACC GCGTTGGGCG AGCAGTTATT CGGACGGCGA GAATTGCTAC 
TGCCTTCCTT TTTTGGATGG CACCATAGGT AACTTTGTCG TCGAAACGAA ACTAGGGTGG 
TTGACGACGC AGGAAGTGTG CGATTTGCTG GGACCGGGAC CAGGAAGGCG AGGACGGCCC 
GTTTACAATG ATATTCAATG CGGTAACGGC CCCCCGAACG ACGACGAAAA CGAATTCCTT 
TGTCCGGGAC GAACAGATGT AAGTGATTGT AAGAGAATTG AGTGCTGTTC ACTAGTAAGG 
GCAAACTATT TTCAATAGCA AGGCTTGGAC TGACTCGTTA TTCCTCTATT AGATTGGAGA 
AGAAGGCTGT GGTCATATAG GACCCAAATG GAACTTTGAT AACGCCGACC TTGCGAACGG 
CGGTCCGCCC CGAGTTCCAT CATTTCCTGA AGACATTCAT CCCGACATCG TTGCAGTTGT 
CGACGTTGTA GGTGGTGTGA CACCAAATGG AAGATCATGG GCCGACAGCT ATTCCGTTAA 
TGACAAGTGC TATTGCGCGA CAACGTTTGA TCATAGCGTT GCTGACGTAA TAGTAGAAAC 
ACCGCGGGGA CGGATGACGA CACGTCAAGC CTGCGAATTG CTTGGACCGG GTCCCGGTAT 
AGAGGGACGG CCGGTGTACA ATGATATACA GTGCGGAAAT GGACCACCGA ATAATGCAGG 
CGATGAGCAT GTGTGTCCTG GACGAACCGA TGTACGTAGA TTGGAACAAG GTGGAGTGGC 
CAGCATTTTC AGACCGTGAT TTTCTCGGGC TTTTTATGGT AGCAGCAATG AAATGACTCA 
CTTGTCCTTT TTTGAAAAAC ACAGATTGGA CCGGAGGGAT GTGGTCAAAT TGGTCCGCGT 
TGGAATTTTG ACGCAGTCGG ATCTTTCCCG CCACTTAGCG CTCCTACGGC TCTTCCCTCT 
TCTTTAGCCA CCGTTAGTAC TCAGGAAGTA AGCAATCCAC CAACCAAATC TCCGAATAAA 
GGCCTTAACA GGATACCAAG TAAGTCGCCA AGTAAGGGAA TCAACAGGGT ACCAAGCAGA 
GACACAACCG CAACCCCGAC TACGGCACCG AATGAGCTGT CAGGTGAAGG CAGCGCGCCG 
TCGCTAGTTC CATCCGCTTC TCAGGCTCCC CTAAGTCCAA ACGTTAGTGG CACGCCTGCC 
GCTGGTCCTA CACGTGCACC TGCACCAACT TTACCTACCT CTTTTCCGTT AACACCTTCG 
GAGGCAACAA GTCAAGCTCC GGCTTCCGCG CTTCCAGTTG AACGCCCGAC AATTAATCCC 
GCATTTACGG TCATTTTTCC TGAAGTATCC CCTAGTGATC CCCCAAGCAG TGTGCCAATC 
GATGCAATTT TTGGTACACC GAGCGAGACG CCTGTTGGGG TGCCGAGTGA TGTTCCTAGC 
GTGTTACCCA GCAATGTTCC TAGTATTCCA CCCAGCGATG CCCCTAGTGA TCTTCCTAGC 
GAAGCTCCCA GTGATCTTCC TAGCGATGTT CCTAGCGAAG CTCCCAGTGA TGTCCCTAGC 
GACGTTCCAA GCGACGCTCC CAGTGATGTC CCAAGCGATG TTCCCAGTGA TGTCCCGAGC 
GATGCGCCGA GCGATGTCCC AAGTGACGTT CCTAGTAGTA TTCCCAGTGG TTTTCCCAGT 
GTTGTTCCCA GTGGCGTCCC GAGTAGTGTG CCCAGTCTAC TGACGGCGGC CCCCAGCACC 
AGCAACGACG GTAACACACC CGAAGGAATC GGCGGATCGG CATCAATTCG GCTGAGCAGG 
AGCAGGGTGG CGGTGTTGAA AACGAGTGGG CTCGTATATT TTGTGATGCT ATTCTTGTAG 
TGCTGACTGT GTGTGAGCTA CAGCATACCA AGAAGGGAAT CCCCGAGAGA GCGCTCATAA 
ATGGCCTTCT TCAGGATTGG TTCAATAGAC TATATGTACT GTCCTTGTCC TTGTGCGCGT 
GCCAATGGAC AAGGAGTAAT TTTTCCTCTT TTTAGACTTT TCCGCGCGGA TAGTGCTTCT 
GTACTTACAG ATAGTTGCTC CCTAGTGTAG TTTTACAAGT GTGGGCAGAA TATCCACTGT 
TAGTGTGCGC CACAAAAT 

 

Protein sequence

MKQHQLARTT AWLLTICLIL LVVVAQEDVH PDVVAVLDVA GGLRPKPRWA SSYSDGENCY 
CLPFLDGTIG NFVVETKLGW LTTQEVCDLL GPGPGRRGRP VYNDIQCGNG PPNDDENEFL 
CPGRTDIGEE GCGHIGPKWN FDNADLANGG PPRVPSFPED IHPDIVAVVD VVGGVTPNGR 
SWADSYSVND KCYCATTFDH SVADVIVETP RGRMTTRQAC ELLGPGPGIE GRPVYNDIQC 
GNGPPNNAGD EHVCPGRTDI GPEGCGQIGP RWNFDAVGSF PPLSAPTALP SSLATVSTQE 
VSNPPTKSPN KGLNRIPSKS PSKGINRVPS RDTTATPTTA PNELSGEGSA PSLVPSASQA 
PLSPNVSGTP AAGPTRAPAP TLPTSFPLTP SEATSQAPAS ALPVERPTIN PAFTVIFPEV 
SPSDPPSSVP IDAIFGTPSE TPVGVPSDVP SVLPSNVPSI PPSDAPSDLP SEAPSDLPSD 
VPSEAPSDVP SDVPSDAPSD VPSDVPSDVP SDAPSDVPSD VPSSIPSGFP SVVPSGVPSS 
VPSLLTAAPS TSNDGNTPEG IGGSASIRLS RSRVAVLKTS GLVYFVMLFL