Gene PHATRDRAFT_49132 details

Gene Information

• Locus tag: PHATRDRAFT_49132
• ID: 7195638
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: -
• Start bp: 8162
• End bp: 10177
• Gene Length: 2016 bp
• Protein Length: 603 aa
• GC content: 52%
• Product: predicted protein
• Protein accession: XP_002183912
• Protein GI: 219127375

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAGT CGACAGCGAG TGCTAAAGTC CTCCCCGCGT CGTCTCGGGC TACCAAGAAA 
GGAAAGCTGC GACCTGCGGA GGTCACGTTT TCCTGGCCCG ACGATTGTCC AGTCCAGTCG 
GAAGACCCGT CAGACGAAGG CCTGGCGCAG CCTTCTTTGC CTCCTGATCC AGCTCTGCAC 
GCTTGCTCCG GAAAGGATAT ACATGTATCT AAAGGGGCAA CGTCGCAGAA TAGCAGCAGT 
GGAAGCGGCA ACAATACTTC CAAGCCAACG AGATATCTCG CCATTCTACC GGGTACGTTG 
ACGCTGCGCA AACCCGCAAA GACGAACGCA CCATTGTTTC CAGAATCTCT CGCAGAGAAG 
GTGGAAGACA GTGTCGTGGC GGACGCCGCG GATTCGAGTG ACGTCAACAA GCCGGAAGTG 
AGGCTTTTGG GGCGTTTGCA ACACGCCTCG TCGACCCATC CCATCTTGAC GACAGCGGCG 
TTTTCGGACT CGTCGTGTGC TCCCACGCAA GGATCCTTGT CCTTCCGAGG TACTTCCGTT 
GCCACCACAT CCAAGTTCCT GGTATTAACG TTGCAACCAA AGAAAGGAAA GATAGTATGC 
AAGCACGTTT TTTCTAACGT TATTGTTTTT GGGGATGCTT GTCTGCACGG GACGGGAGAT 
GCAGTACCTT CGGTTGCGCC AACCTCCGCT ATTGACGCAG TGTCGGGCAA ACGCTTCAGC 
TCTACTAGTG ACGATAGGAA AGCAGCAGTA GCCGTGATCG CAACAGTAGA GCCCCAGGGC 
ACCACTTCCA ACGCAGCAAG CTTATCTCAC CAAAAACTGG AACCGCAGGA TACTTGTAAA 
AAAGGGGAGG ACGACGAAAG CGTATTTATG GCTACTACCG AGAAAAAACA AGGCAACCTA 
AAACGATTGA GCACTGGTGG GGAACCACTC TCGGACAGCA GTGATTCTGA TCGAGACGTT 
GTTCGCCATC CGAATCTTGA GGTTTCTGCC ATGCTACCCG CAAGTAGACG ACCTCGACGC 
GCGTCACGCA AACCGGTACA ATACAACACA GTGGAAAGTG GTGACAAAGA TAGCGACACC 
GATCCCAGTG GCAGCGAGGA TAACAGCAAT ATCGACTGCA GTGGAAAACG GAAGCAACCA 
ATTGCAAAGC CGATGGCGAA CAAGCGGACA CGCCGATTGC TGTCCAATGC TATCACACAA 
TCGCAAGAAG TAATCAACGA CTTGGACGAG TCCATTGACA TCAACATCAG CGAAGAGAAT 
GGAGCGGTCG CTTACAAGCC TGCTAGTGAA AATTCGGTGA GGCGCGACCA TGGGTCAGCG 
CGATCGACAG AAACTGGCAA GTTGGCCGAG AGTCAGCCTG TTTGCCAAAA TAGGCGGAAG 
TCCGATGCGA ATAAGCAGTT GGAAGCGTCT TCTCTTTCAA CCTCCGGTAC GACCAAGAGG 
CACCGTATCG TGCAGCCAGC GACCAAGACC CGACCAAAAT CTTTGAGCAG CAATGGACAG 
ACAGAACTGC AGAAGAAAGT CAAGCTTGGG AAGAAGAGTT CCTTCGCTTC CCCGGACATC 
GATTCCGCTA TGATTGTTAA CAGCAGCGTG ACCGCCCCCG AAAACGAAGC ACCGTCTCTT 
CCGGGATCGC CTGTACGGCA ACATCGACAC CCGCTGACTC CCTCCAGCTC GAAGAAGGCA 
AATAAGTCTA CATCGACAAT CTCGAGCACT CCCCGAAAGC GCCGCAAACG GGCATTAGCT 
CATGCCACTT CACCGTCCAA AAGCAGAACG ATTGATTTGA CTCTCGACAC CGATTTGGAG 
TTTTTGGGAT AATACGATTT TGTAACTCTT TTCGTTTGAC TCCGTGATGC TTCACCTACT 
CTATTGAGTC AACGACGCTG TGAAGGAATT GTAATTGCGT TTTGAGATCA CTCACGGCAA 
AGAAACACGT TGGGCTTCCA TCGTTTGTAT GTGGTAAATG AAGTCAAATT AATGGTTCTA 
CAAACCATGA AATTTGTGTC GCTACTGGCT ATGTCC 

 

Protein sequence

MAKSTASAKV LPASSRATKK GKLRPAEVTF SWPDDCPVQS EDPSDEGLAQ PSLPPDPALH 
ACSGKDIHVS KGATSQNSSS GSGNNTSKPT RYLAILPGTL TLRKPAKTNA PLFPESLAEK 
VEDSVVADAA DSSDVNKPEV RLLGRLQHAS STHPILTTAA FSDSSCAPTQ GSLSFRGTSV 
ATTSKFLVLT LQPKKGKIVC KHVFSNVIVF GDACLHGTGD AVPSVAPTSA IDAVSGKRFS 
STSDDRKAAV AVIATVEPQG TTSNAASLSH QKLEPQDTCK KGEDDESVFM ATTEKKQGNL 
KRLSTGGEPL SDSSDSDRDV VRHPNLEVSA MLPASRRPRR ASRKPVQYNT VESGDKDSDT 
DPSGSEDNSN IDCSGKRKQP IAKPMANKRT RRLLSNAITQ SQEVINDLDE SIDINISEEN 
GAVAYKPASE NSVRRDHGSA RSTETGKLAE SQPVCQNRRK SDANKQLEAS SLSTSGTTKR 
HRIVQPATKT RPKSLSSNGQ TELQKKVKLG KKSSFASPDI DSAMIVNSSV TAPENEAPSL 
PGSPVRQHRH PLTPSSSKKA NKSTSTISST PRKRRKRALA HATSPSKSRT IDLTLDTDLE 
FLG