Gene PHATRDRAFT_42274 details

Gene Information

• Locus tag: PHATRDRAFT_42274
• ID: 7195618
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: +
• Start bp: 94387
• End bp: 94971
• Gene Length: 585 bp
• Protein Length: 194 aa
• GC content: 50%
• Product: predicted protein
• Protein accession: XP_002183809
• Protein GI: 219127161

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.257767
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTCCA AGAGTTGGTC TCCGACCTAT TTGGCGAATC AGCTCTGGGC GAAGCAACCC 
AAAGCCAACG CCGAGTTATT TGCTTTGACG TACGGTGCGC TCGTGGCTGA ACTCGTTCGT 
GACCTCGAAA CCAACGATAA GATCCAGGCC GAACTGGACC GAATGGGCCA CAGTATGGGT 
ATTCGAAGTG TCGAAGAATT CCTCGCCAAG GCATCGCTCG AGCCGCAATC ACAAACTGCC 
GTGACGTGCA GCCAATTCAA GGATACCAGC GACGTTCTCA AAATGGCTCT AAAAATGTTT 
CTGGGAATAA CTACGGAAGC CGGTGTGCAA GAAGACTCGC ATTTTTCCAT TCAGTTTGCC 
GAAAATCCAT TGAGTCTATT TGTGGAATTA CCTCCGGACC GATCTGATTT GGAATACTCG 
CAGCTGTTGT GCGGATACGT CCGGGGGATG CTGGAAATGT TGCAGTTTGA TGTGACGGTT 
ACCATGGCAC AATCGGTACT ACGAGGGGAC GAAGTCAACG AAATGCGGGT CGATTTGAAT 
CAAGTCTTAC AGGCCGGCGC TGGCGACGAT TATCAAGAAG AATAA 

 

Protein sequence

MASKSWSPTY LANQLWAKQP KANAELFALT YGALVAELVR DLETNDKIQA ELDRMGHSMG 
IRSVEEFLAK ASLEPQSQTA VTCSQFKDTS DVLKMALKMF LGITTEAGVQ EDSHFSIQFA 
ENPLSLFVEL PPDRSDLEYS QLLCGYVRGM LEMLQFDVTV TMAQSVLRGD EVNEMRVDLN 
QVLQAGAGDD YQEE