Gene PHATRDRAFT_39961 details

Gene Information

• Locus tag: PHATRDRAFT_39961
• ID: 7195573
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: -
• Start bp: 466662
• End bp: 467366
• Gene Length: 705 bp
• Protein Length: 205 aa
• GC content: 53%
• Product: predicted protein
• Protein accession: XP_002183998
• Protein GI: 219127554

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 0.49735
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACCAGC TCTTATCTGT TTCGCTCCTC GTGACTTCGG TCAGTGGATT CGCCTTTGTG 
CATACAACCG CCGGGACTGC GACAACGGCG CTGCATATGG GACTCTTTGA CGGAGTAAAG 
GATGCCTTTT CGGCGCCCGC TCTGGAACGA ACCTCCATTG ACAGCGAACG GGAAACACCA 
ATTGATCGAT GGATGGGCTG GTCCGTAGTT TCCGAGAATC AGCAACAACC AGAAAGTGCC 
GTCCGTAAGT AACGAAGACC CGTGTTCTGC GTTTGCGGTC AACCTTGCCG TTCCTCACGA 
ACCCCATTGT TCCGCGTTTG TGAAACAACA GCTGCCAACT TTGTCGACGC CATGGACGAC 
ACCAACTACG TGGCGGTAGC ACTGTCCAAA CCGATGGGAA TTGTGTTTGA AGAGAACGAT 
GCCGATTTCG GAGGAATTTT CGTGCAGAGT CTCAAAGAAG GCGGTGTCGC CTCGGAGAAC 
GGCCTTTTGC AGGAAGGCGA TCAACTCGTG GCCGTCAACA AGGTCAAAGT GGCCGGCATG 
GTCTTTGACG ATGCCTTGGG AGCCATTGTG GAGGCACCCG GTGACACCAC CAAGTTAGTG 
TTCTTCCGAG GCAGCGCCAA GCAATTTTAT GGACCAACCG GTGCGAACAA GGAGTGGGTG 
GACGAGTTTG TCTCCAAGGG TGGAGTAGAA GTGTCGAAAA AATAA 

 

Protein sequence

MNQLLSVSLL VTSVSGFAFV HTTAGTATTA LHMGLFDGVK DAFSAPALER TSIDSERETP 
IDRWMGWSVV SENQQQPESA VPANFVDAMD DTNYVAVALS KPMGIVFEEN DADFGGIFVQ 
SLKEGGVASE NGLLQEGDQL VAVNKVKVAG MVFDDALGAI VEAPGDTTKL VFFRGSAKQF 
YGPTGANKEW VDEFVSKGGV EVSKK