| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39921 |
|---|
| Symbol | |
|---|
| ID | 7195707 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011689 |
|---|
| Strand | - |
|---|
| Start bp | 368109 |
|---|
| End bp | 369662 |
|---|
| Gene Length | 1554 bp |
|---|
| Protein Length | 517 aa |
|---|
| Translation table | |
|---|
| GC content | 48% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183979 |
|---|
| Protein GI | 219127515 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTGA GAAGAAGAGA GAGGCACGTA GGCCGCAGTC CTCTTGATGG AGCTGGTCGG
CTGCACTCGG TCCTGCTCGA TGCCGACGAG AAACGACCCC GTCGGCCGTA TTGGCGAAAG
GCGTTACGGC AGCTTATCAT TTTTTGTCTA TCTTTGATGA TTTTTTGGGT TTTCTACAGT
TCTTTACCAT TAGCCAGACA ATCTTCTTTA CTTGACTCGA TTGGGCGGCA ATTTCTTTCC
GAAATGACCT GGTCGATCGT TCGACAAGAA CGTAACGCGA TTGCTGGGTT GGTTGTTCAG
ATTGTACCGA AAGCGACAGT TTTGACCGAT TTTAAACCAA TGGCTCTACC ACTCTTGGCT
CTGCCAATCA CCACAGACGA TGCTGAAGAC TTTGGTGCTT TAAACATAAA TTCGCTGGGT
ACTTCAGATT GGGTTCGTTC GATTGCCGCT GACGAATATG AAAAATATGA AGCGGAACGC
GGTTCTTGGA TGGATCACAT GGCTCAGCTG CAGCCCAATC TTCCCGACAA ACTGTTGTAC
AACGACGACA TCGTGGGAAA GCCTACCTGT CGAAGGAACA ACTGGGCTCG CGTGTCTCAT
CCCACATGTA ATATTTTGCA CGAAACCCGA TTCGACCAAT CCTACGAACC AACGGAACTA
TTTCAAGAAT ACAAAGTCAA GTTTGCGGGC GATGGTGCAT ATCGGAGTGT GTGGATTCTT
GAGCGGCCGG CCGTATCTAC GTTTGCTCTG AAACAGTTTC AGCTAGAAGA ATACGAGTTA
GGTGTTCGTG AGCACTTTCA AGTTCAGAAA GAAGCCTCGA TCCTGGACGC GTTGTCCGAC
AGCCCTCGTA TCATTAATAT CCACGCCCAT TGTGGAGTAT CTCTTTTCAT CGAATCAGCG
GTTGGTACGC TAGAAGCAGA ATTGGCGTCC ACAAACGGAA CGATTGAGTT GCATGAACTC
GGCCAGTTGC AACGATTAGA CGTGCACCCC CTGAACAATT TGACACTGGC AGAAAAGCTG
GACCTCGCCT TAGCTATGGC AGAATCTTTG GCAGATATAC ACGGTTTTGA AGGTGGGGCA
ATCGGCCACG GCGATATACA TCCCTCACAG TGGCTTCAAA TGGCAAATGG CGGCGTCAAA
CTAAATGATT TCAACTCCGC CGAAATATAC GAGTACAATG TTGACGAAGG CGTCTATTGC
AAAACTTATC ACAACTTTCC AGGAGCATTC CGAAGTCCTG AAGAAGTCCA GCATCGCCCC
TCCAACGAAA AGATTGACGT TGTGCCTTTG GGAAACAGCA TTTACGTCCT CGTAACGGGA
CTTTTTCCGT ACTACGAGTT GGGCGACAGT GAAAAGGAAG CAAATCGCAA GGTCAAGCAA
GGAGTCCATC CTTACGTTGA TACGCGCTAC CGCAACCGAT CTGTCGTCGA ACGAGAACTT
ATTGACGTCA TGGAACGTTG CTGGGAATTT GATCCAGATA GCCGAGTGTC TTCATTCGAA
GTTGTGTCAC GATTGAGAAA TCTCAAAGCA ATGGTCGCGG AGAAGCAAAT CTAG
|
|---|
| Protein sequence | MSLRRRERHV GRSPLDGAGR LHSVLLDADE KRPRRPYWRK ALRQLIIFCL SLMIFWVFYS
SLPLARQSSL LDSIGRQFLS EMTWSIVRQE RNAIAGLVVQ IVPKATVLTD FKPMALPLLA
LPITTDDAED FGALNINSLG TSDWVRSIAA DEYEKYEAER GSWMDHMAQL QPNLPDKLLY
NDDIVGKPTC RRNNWARVSH PTCNILHETR FDQSYEPTEL FQEYKVKFAG DGAYRSVWIL
ERPAVSTFAL KQFQLEEYEL GVREHFQVQK EASILDALSD SPRIINIHAH CGVSLFIESA
VGTLEAELAS TNGTIELHEL GQLQRLDVHP LNNLTLAEKL DLALAMAESL ADIHGFEGGA
IGHGDIHPSQ WLQMANGGVK LNDFNSAEIY EYNVDEGVYC KTYHNFPGAF RSPEEVQHRP
SNEKIDVVPL GNSIYVLVTG LFPYYELGDS EKEANRKVKQ GVHPYVDTRY RNRSVVEREL
IDVMERCWEF DPDSRVSSFE VVSRLRNLKA MVAEKQI
|
|---|
| |