Gene PHATRDRAFT_39918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39918 
Symbol 
ID7195706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp361199 
End bp361981 
Gene Length783 bp 
Protein Length260 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183977 
Protein GI219127510 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGC TCAGCTCGAG TCCCCGAATT GTGGACATGT ATGGTTACTG TGCCTCTTCG 
ATAGTTGCCG AAGCCATGCC GACAGACATT ACGACTCAGC TTGTGCCCGG CGATAAGGAC
CAATACGACC GTGGTCGCAT GAAACAGAAA GATCTCGACA AACTACAAAC AACGGATGTT
TACCCACTCA ACAACTTCAC TGCCATTGAA AAGCTGAGCC TAGCTTTGAC AATGGCCGAA
AGTTTAGCCG ATTTGCATGG TTTCGAAGGT GGCGTTATTG TGCACGGAGA CTACCATCCG
GACCAGCACC TGCTGTCCGA CAAGGGCCAA CTAAAACTCA ACGATTTTAA CAATGGTGAA
TTCCTCCACT GGAACGACGT GGACGAAAGG TACTGCTACT ATTCCAGGCA ATTTGGTGGA
ACGTACAAGG CACCGGAAGA ATTCTCCGGA GGCTACTGTA ATCAAGAAGT CGATACCTGG
AGTTTCGGCA ACAACATATA CGGCTTACTG ACTGGTCTCT ACCCTATGTA CGAAACATAC
AGTCACTCCG AAGTTCGGGA ACGCTTTTTG AACCACGAGT TGCCCTACGT GGATCCACGG
TACCGCAGTC GTAGTTATAT TGAAGGGCGG CTAGTGGAAA TAATGGAAAA ATGCTGGGCG
TACGAGCCCG AGGATCGCGC TTCCATTTTT GACGTGGTGA TCTTCCTCCA GGAAACCCTA
AGGAAGCACG AAGCAGAGCA ACGAGAGCTT TTGAAGAAAC ACGGTGCACA TCAACAAGTT
TAA
 
Protein sequence
MEKLSSSPRI VDMYGYCASS IVAEAMPTDI TTQLVPGDKD QYDRGRMKQK DLDKLQTTDV 
YPLNNFTAIE KLSLALTMAE SLADLHGFEG GVIVHGDYHP DQHLLSDKGQ LKLNDFNNGE
FLHWNDVDER YCYYSRQFGG TYKAPEEFSG GYCNQEVDTW SFGNNIYGLL TGLYPMYETY
SHSEVRERFL NHELPYVDPR YRSRSYIEGR LVEIMEKCWA YEPEDRASIF DVVIFLQETL
RKHEAEQREL LKKHGAHQQV