Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39918 |
Symbol | |
ID | 7195706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 361199 |
End bp | 361981 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183977 |
Protein GI | 219127510 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGC TCAGCTCGAG TCCCCGAATT GTGGACATGT ATGGTTACTG TGCCTCTTCG ATAGTTGCCG AAGCCATGCC GACAGACATT ACGACTCAGC TTGTGCCCGG CGATAAGGAC CAATACGACC GTGGTCGCAT GAAACAGAAA GATCTCGACA AACTACAAAC AACGGATGTT TACCCACTCA ACAACTTCAC TGCCATTGAA AAGCTGAGCC TAGCTTTGAC AATGGCCGAA AGTTTAGCCG ATTTGCATGG TTTCGAAGGT GGCGTTATTG TGCACGGAGA CTACCATCCG GACCAGCACC TGCTGTCCGA CAAGGGCCAA CTAAAACTCA ACGATTTTAA CAATGGTGAA TTCCTCCACT GGAACGACGT GGACGAAAGG TACTGCTACT ATTCCAGGCA ATTTGGTGGA ACGTACAAGG CACCGGAAGA ATTCTCCGGA GGCTACTGTA ATCAAGAAGT CGATACCTGG AGTTTCGGCA ACAACATATA CGGCTTACTG ACTGGTCTCT ACCCTATGTA CGAAACATAC AGTCACTCCG AAGTTCGGGA ACGCTTTTTG AACCACGAGT TGCCCTACGT GGATCCACGG TACCGCAGTC GTAGTTATAT TGAAGGGCGG CTAGTGGAAA TAATGGAAAA ATGCTGGGCG TACGAGCCCG AGGATCGCGC TTCCATTTTT GACGTGGTGA TCTTCCTCCA GGAAACCCTA AGGAAGCACG AAGCAGAGCA ACGAGAGCTT TTGAAGAAAC ACGGTGCACA TCAACAAGTT TAA
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Protein sequence | MEKLSSSPRI VDMYGYCASS IVAEAMPTDI TTQLVPGDKD QYDRGRMKQK DLDKLQTTDV YPLNNFTAIE KLSLALTMAE SLADLHGFEG GVIVHGDYHP DQHLLSDKGQ LKLNDFNNGE FLHWNDVDER YCYYSRQFGG TYKAPEEFSG GYCNQEVDTW SFGNNIYGLL TGLYPMYETY SHSEVRERFL NHELPYVDPR YRSRSYIEGR LVEIMEKCWA YEPEDRASIF DVVIFLQETL RKHEAEQREL LKKHGAHQQV
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