| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39888 |
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| Symbol | |
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| ID | 7195692 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011689 |
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| Strand | - |
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| Start bp | 279693 |
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| End bp | 281059 |
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| Gene Length | 1367 bp |
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| Protein Length | 443 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183962 |
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| Protein GI | 219127479 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCAGC GCACGTTGTC GGCACCCCTG TCGTCGGGTA ACCCCGCACT CTCTGCCCTG
CCTACCGCAT CGACACCCGA CTGCGTGCGT CGCGGAGGCT TCGGCGGAAC CAAGATCCGT
CCGAGAAACC GTCCATCGAA TACACGCTCG CTACCGTCCC CTGCGTGGCT CGTCCGCGGA
ACGGTGGTGG CGCTCGTTCT CAATATCGTT TGGTTGCACG GTTGTCTACC CGATTCGCAA
GCGTTTAACC CCGTCGTTAC CTCCCCATTA TCATGGCTGC AGTACAATCC ACAATCACAG
CAACAGTTTT CCCCGCGCTA CCACAATCGA CCTTATCAAC ATCAACTCAC GGAAAACAGT
TCCAACGAAA CGCAAGTCGT AGCCCGCATC CAGCGAGATC TGCGCACTGT TCTGACAGGC
CAGGTCGAAT GCGCCCAACG CTACACGTTG TCTAACCAAA CGCTACCTCA GCGTTTGCGA
GGAAAAGGTG CAACGACACC TAGCTTGCTA CCCTTTGGTA GTCTGACCGA CCTGCAGAAT
CATCACCAGC CACAACAAAA TGACACTATT GTTTCGAATC AAAGCCGAAC GGACTGCTAC
ATTCTCGATC CATCGTCAGG CCCGATTGCG CTCTCGTCCA CCTATTCCAT AATGGTCGTA
GCGGAAAACG CCACTGCACA TTTCCGTACC ATTGTAGTCA ACGTTCTACA ATGGCTCTTG
GACGAGAGTG TAGCCGACAT TACCATTTTC CAGCCTCAAC AATCGCTTAC GTTTCCCCGT
ACACAAACGT ACAACGATGA TTCAGTCTAC GCCCAGCGTC TATGGGCGTG GCACGAAAAC
GCAGCACACA AGGTTTCCCT CGTCCTCGTA TCCGATAAAA AAGAGTCATC GTCCATCAGT
CTCTGGGATG CCATGCAAGG AGTAGCAGTC CTCTCCGAAC GAGTCCTGCT CGTATCGGAC
GGAATCATGC CTTGGCCTCT TTCGCAACAC TTGGTACAGC AGACCTGGCA GGACTGGCGA
CAACAGCCAG CCAACATTCA CTCGACATGG CTTTGGGAAA ACCTCAACGG GCAGCAGTGC
GCAGGTCTAT CACAGGAATC GTCCGACGGG TCCGCTTTAC CGATCGAGTC GCTATCGCTG
GGAATTCACT TTTTCCACGC CGACTATCTT TGCTTTTGGC AAGCACCAAG TTTAGTCGTG
TTGATGAGTC GGATCGGTGG TGTGTATCGA TCCCTTACGT GGACGGAATC GCAGTGGATC
CTGCTTCTGT GGCTAGGGAG AGTCTCCGGA GCGCCCCCGG CCAACGCAAG CGTACCGAGT
CCTCCAAACT CACGATCTCT TGTGACGCGA CCGTTTGGCA GTGGTAG
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| Protein sequence | MQQRTLSAPL SSGNPALSAL PTASTPDCVR RGGFGGTKIR PRNRPSNTRS LPSPAWLVRG
TVVALVLNIV WLHGCLPDSQ AFNPVVTSPL SWLQYNPQSQ QQFSPRYHNR PYQHQLTENS
SNETQVVARI QRDLRTVLTG QVECAQRYTL SNQTLPQRLR GKGATTPSLL PFGSLTDLQN
HHQPQQNDTI VSNQSRTDCY ILDPSSGPIA LSSTYSIMVV AENATAHFRT IVVNVLQWLL
DESVADITIF QPQQSLTFPR TQTYNDDSVY AQRLWAWHEN AAHKVSLVLV SDKKESSSIS
LWDAMQGVAV LSERVLLVSD GIMPWPLSQH LVQQTWQDWR QQPANIHSTW LWENLNGQQC
AGLSQESSDG SALPIESLSL GIHFFHADYL CFWQAPSLVV LMSRIGVDPA SVARESLRSA
PGQRKRTESS KLTISCDATV WQW
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