Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39880 |
Symbol | |
ID | 7195525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | + |
Start bp | 263975 |
End bp | 264838 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183841 |
Protein GI | 219127227 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACTT ATTTTGAAAA GAAGACTCCC GTGTACTACT CGCCGGGCAA AGCAGTTGCA CCTTCTGCCA TAGGGGACGC ATTTGCGCTT CCCGTTGGAG CTGAAGAACC GAAGCCAAAA CGTCCTCTGT CAGCTTACAA CTTCTTTTTC AAGAGAGAAC GCCAGGATAT TCTGAGAAAT ACGCCAGTCC GGCCTCAAGG TAAGCCTCGA CGCTCGCATG GAAAAATTGG CTTCGCCGAC TTGGCGCGTA CAATTGCTGC TCGCTGGAAA GGTGCTGACC ATGCAGTGAA GGATCATTTT GAAAACATGG CCAAAATGGA CAAGGATCGC TATGCACGAG AATTGGAAGA TTGGAAGATC AATCAAGATA GCCAGAAGCT CGTAGGTGAA AAGAGTATTC CTCATTCATG CTCTCCGTTC TCGCCTTACT GGGAGGAGAA TCAAGGAGAT GACTTCGAGC CTATCGAGTT TCAAAAGAGC ACAAAGACCC CAGCAAATTC TCTTCCGATC ACCCAGGTAG TTACTCCCAC GTTTACGACC AAGCAACCCT TAGGCCTCTC CTATGCGTCT GACCTTGCCC GAAGTGATCT CGGGTTCGGT GACTACAACG GAACAGAGCA ATGGGCTTAT AGCGACCGGG TTTCAACGGT ACGTCCCGAA AAGCTTCGAG TCATCGAAAT CGATGAAGTT GATTTTGTTA ATTCGTGCTC CCTTCCCCGC ATGGGCTATA AGAACCCACG CGAAACCATG CTTCGATACA CAAATTTTTA TGATCGACGC CGTCCCAGAT TTTCTGCAGT CTTCCAGGAG GAAGGAGACC GATTGGAGGA TGAGCGCGCT CGTTTTCTTT CGTTTCATCA TTGA
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Protein sequence | MTTYFEKKTP VYYSPGKAVA PSAIGDAFAL PVGAEEPKPK RPLSAYNFFF KRERQDILRN TPVRPQGKPR RSHGKIGFAD LARTIAARWK GADHAVKDHF ENMAKMDKDR YARELEDWKI NQDSQKLVGE KSIPHSCSPF SPYWEENQGD DFEPIEFQKS TKTPANSLPI TQVVTPTFTT KQPLGLSYAS DLARSDLGFG DYNGTEQWAY SDRVSTVRPE KLRVIEIDEV DFVNSCSLPR MGYKNPRETM LRYTNFYDRR RPRFSAVFQE EGDRLEDERA RFLSFHH
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