Gene PHATRDRAFT_39880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39880 
Symbol 
ID7195525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp263975 
End bp264838 
Gene Length864 bp 
Protein Length287 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183841 
Protein GI219127227 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACTT ATTTTGAAAA GAAGACTCCC GTGTACTACT CGCCGGGCAA AGCAGTTGCA 
CCTTCTGCCA TAGGGGACGC ATTTGCGCTT CCCGTTGGAG CTGAAGAACC GAAGCCAAAA
CGTCCTCTGT CAGCTTACAA CTTCTTTTTC AAGAGAGAAC GCCAGGATAT TCTGAGAAAT
ACGCCAGTCC GGCCTCAAGG TAAGCCTCGA CGCTCGCATG GAAAAATTGG CTTCGCCGAC
TTGGCGCGTA CAATTGCTGC TCGCTGGAAA GGTGCTGACC ATGCAGTGAA GGATCATTTT
GAAAACATGG CCAAAATGGA CAAGGATCGC TATGCACGAG AATTGGAAGA TTGGAAGATC
AATCAAGATA GCCAGAAGCT CGTAGGTGAA AAGAGTATTC CTCATTCATG CTCTCCGTTC
TCGCCTTACT GGGAGGAGAA TCAAGGAGAT GACTTCGAGC CTATCGAGTT TCAAAAGAGC
ACAAAGACCC CAGCAAATTC TCTTCCGATC ACCCAGGTAG TTACTCCCAC GTTTACGACC
AAGCAACCCT TAGGCCTCTC CTATGCGTCT GACCTTGCCC GAAGTGATCT CGGGTTCGGT
GACTACAACG GAACAGAGCA ATGGGCTTAT AGCGACCGGG TTTCAACGGT ACGTCCCGAA
AAGCTTCGAG TCATCGAAAT CGATGAAGTT GATTTTGTTA ATTCGTGCTC CCTTCCCCGC
ATGGGCTATA AGAACCCACG CGAAACCATG CTTCGATACA CAAATTTTTA TGATCGACGC
CGTCCCAGAT TTTCTGCAGT CTTCCAGGAG GAAGGAGACC GATTGGAGGA TGAGCGCGCT
CGTTTTCTTT CGTTTCATCA TTGA
 
Protein sequence
MTTYFEKKTP VYYSPGKAVA PSAIGDAFAL PVGAEEPKPK RPLSAYNFFF KRERQDILRN 
TPVRPQGKPR RSHGKIGFAD LARTIAARWK GADHAVKDHF ENMAKMDKDR YARELEDWKI
NQDSQKLVGE KSIPHSCSPF SPYWEENQGD DFEPIEFQKS TKTPANSLPI TQVVTPTFTT
KQPLGLSYAS DLARSDLGFG DYNGTEQWAY SDRVSTVRPE KLRVIEIDEV DFVNSCSLPR
MGYKNPRETM LRYTNFYDRR RPRFSAVFQE EGDRLEDERA RFLSFHH