Gene PHATRDRAFT_39869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39869 
Symbol 
ID7195683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand- 
Start bp240345 
End bp240905 
Gene Length561 bp 
Protein Length186 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183953 
Protein GI219127460 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTCTTG CCGCCTTGGA TAAATTTGCC AACACGCCGT GGCTCATGGT GGCGGCTGTT 
CTTGTCCACA TTCTTTGCAC GCAATACATG AGCTCTCTTA CACAGCAACT TGGCAAGGAC 
AACCCACCGC CAGACATCCG ATTTGGCTAT ACATCCGAAA GTTTGAACGC ATGGTACGAC 
GCTATTGGTG AGGACGGATG CAAAATCTAC CAGCAGCATG TATTCGTCGA TCTTTTTCCG 
TATATGCAAT CCTACACCCT AGTTGGAGGC GCCTTACTGC TGCAACAGTT GCGCATTATT 
GGTTGGAACG AAAATATTGC ACTCATTTTC CCAATGGTCA TGTTGATGGA CATGATCGAA 
ACCTGTATCC CGGCCTACGG TTGCTCTATC TATCCTGAAA AGCGGCTACG GCCAGCGTAC 
GTCCAAGCCT CTGCTTCCGC AAACCAACTG AAGTGGACCA ATTTTGGGAT TGGAATGTCT 
ATCCTGTCAA TCCTATTCGT GTATAACTCG TTTTTTCCTC CCAAACATGA TGAAGCAAAA 
GCCGAGGAAA AGACGGATTA G
 
Protein sequence
MFLAALDKFA NTPWLMVAAV LVHILCTQYM SSLTQQLGKD NPPPDIRFGY TSESLNAWYD 
AIGEDGCKIY QQHVFVDLFP YMQSYTLVGG ALLLQQLRII GWNENIALIF PMVMLMDMIE 
TCIPAYGCSI YPEKRLRPAY VQASASANQL KWTNFGIGMS ILSILFVYNS FFPPKHDEAK 
AEEKTD