Gene PHATRDRAFT_39868 details

Gene Information

• Locus tag: PHATRDRAFT_39868
• ID: 7195682
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011689
• Strand: +
• Start bp: 239499
• End bp: 240245
• Gene Length: 747 bp
• Protein Length: 248 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002183837
• Protein GI: 219127219

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTGGA TCAAGTTTCT GTTTCTATTG ATGGCTTCGG GCTGGAAAAG GGGGAACTCT 
TGGAGATTGA CATCACAGTC GTCTAATTTG AGCAAGATCC GTCCTCGGTC AGGAACAATC 
ACACCGGGAA TTTTGCTGTA CGCTACCTTA CCAAAAGGCT ATGAAGAGGT CGGTACACGA 
CTAATCCAAG AAGCTGGTAG ACAATGTGGA ATAACAGATG ACAATCGGCT GAAGGCGGAA 
TGGAAAGCGG GACGCATAAT AGTGACCGTT TACGGGGATT CCTACGTTTC GGATCCAGTC 
GATAGTGATG CCGACTTCGA AGAAGGCGAC GACTACATCG ACATTGATGA CAGAGAAATG 
GAGCATTTAG AGGTAGCGGT AAATGCAGTT GCATCACCTC CCCCCGGTGC CGTCGATGTG 
ACCCAGCTGA CTCGCGCCAT AAATGCAGCA TTTGACGCCG ACGAAGTGGG GTTGGCAATT 
GCCGAGGCGC ATGAAGTGGA AGTTACAACC CCCGGCGCTT CCGACGAACT AAGCGGTATC 
ATGTTTCAGT CTTACCGTGG ATTTGATGTT ATTGTACAAC ACATGGACAA AAATACCAAG 
AAGCAAAAGA TTATCGAAGG ACGATTGCAC GAGAGGAACG ACGAATTTAC GGTAATCAAC 
ATCAAAGGGC GAATGAAGAA CCTCAAAAAT CAAGACATTA TATCGGTCAA ACTACCAAAA 
GCAAAACGAG AAAAAGGATC CCAGTGA 

 

Protein sequence

MDWIKFLFLL MASGWKRGNS WRLTSQSSNL SKIRPRSGTI TPGILLYATL PKGYEEVGTR 
LIQEAGRQCG ITDDNRLKAE WKAGRIIVTV YGDSYVSDPV DSDADFEEGD DYIDIDDREM 
EHLEVAVNAV ASPPPGAVDV TQLTRAINAA FDADEVGLAI AEAHEVEVTT PGASDELSGI 
MFQSYRGFDV IVQHMDKNTK KQKIIEGRLH ERNDEFTVIN IKGRMKNLKN QDIISVKLPK 
AKREKGSQ