Gene PHATRDRAFT_39838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39838 
Symbol 
ID7195629 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp155160 
End bp155631 
Gene Length472 bp 
Protein Length148 aa 
Translation table 
GC content54% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183823 
Protein GI219127190 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.070507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTGCT TCCAACCCAT GACCTATGCA TTCCAGCCAC GCCCCGCCTC AGCCTTGACC 
GTCTCCGAGC ACCTTGTCTT TACCCTACAA TCAAACGTAT CCGTTCGTCA ATGTGTTCTA
CCAACACGGA ACTGCAGCTT CTAAAGCCGG CCACGACGCT CTGTTGGGTG CTCCGGATTC
TCGATTTGCA CCAAAGTCCG TAGGGGACCA ATTCGATGGC TACCGATTTG GAGGAAGCGT
TCCACCAAAT CGACAAACAA TTTCTGCTGC AACTCTTTCA ACCCGAGTTT GCCCGTTGAA
CGGGCACCAC GACTCCACCA TTGGAGGCCA TTCTGCGCCG GATACTGCAC CAGCTCGTTT
CCCAATATTG CGACCCAGTG GGCAAATGCG GTACGGAACG GAGGGTGCTG CTGGCTTTGC
ACTAATGGCG GGCGGGTCCA GCAACAAAAT CGTAACCTTT GGTTGGCCAT GA
 
Protein sequence
MSCFQPMTYA FQPRPASALT VSEHLVFTLQ SNVSVRQSSK AGHDALLGAP DSRFAPKSVG 
DQFDGYRFGG SVPPNRQTIS AATLSTRVCP LNGHHDSTIG GHSAPDTAPA RFPILRPSGQ
MRYGTEGAAG FALMAGGSSN KIVTFGWP