Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39838 |
Symbol | |
ID | 7195629 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | + |
Start bp | 155160 |
End bp | 155631 |
Gene Length | 472 bp |
Protein Length | 148 aa |
Translation table | |
GC content | 54% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183823 |
Protein GI | 219127190 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.070507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCTGCT TCCAACCCAT GACCTATGCA TTCCAGCCAC GCCCCGCCTC AGCCTTGACC GTCTCCGAGC ACCTTGTCTT TACCCTACAA TCAAACGTAT CCGTTCGTCA ATGTGTTCTA CCAACACGGA ACTGCAGCTT CTAAAGCCGG CCACGACGCT CTGTTGGGTG CTCCGGATTC TCGATTTGCA CCAAAGTCCG TAGGGGACCA ATTCGATGGC TACCGATTTG GAGGAAGCGT TCCACCAAAT CGACAAACAA TTTCTGCTGC AACTCTTTCA ACCCGAGTTT GCCCGTTGAA CGGGCACCAC GACTCCACCA TTGGAGGCCA TTCTGCGCCG GATACTGCAC CAGCTCGTTT CCCAATATTG CGACCCAGTG GGCAAATGCG GTACGGAACG GAGGGTGCTG CTGGCTTTGC ACTAATGGCG GGCGGGTCCA GCAACAAAAT CGTAACCTTT GGTTGGCCAT GA
|
Protein sequence | MSCFQPMTYA FQPRPASALT VSEHLVFTLQ SNVSVRQSSK AGHDALLGAP DSRFAPKSVG DQFDGYRFGG SVPPNRQTIS AATLSTRVCP LNGHHDSTIG GHSAPDTAPA RFPILRPSGQ MRYGTEGAAG FALMAGGSSN KIVTFGWP
|
| |