Gene PHATRDRAFT_39796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39796 
Symbol 
ID7195646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp51850 
End bp52371 
Gene Length522 bp 
Protein Length173 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183920 
Protein GI219127391 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACATG AAGCTCCCTG TTTGGTAGGT GTCGGTACTT TCTTTCGCTT TGCTTTGAGC 
GTGGGGGATG TATGTGGTCG CTCGCGCGAT GACACAGTCA CGTTCGCTTC GAAAATTCAT
GATCCTATGG CAGAAGGAGT GCTACCAAAT CCTATCACCG CCAACAAGAA AACAAGGTCA
GTTTCCTTTG ACGAAATTCA AATCCGCAAC TACAACACAA TTGTCGGCGA CCATCCTTTG
TGTATGTCGG GGTTTCCTTT GAGTCTGGGT TGGGAAGTAG ATAGCACAGA ATTGTATTCT
GTCGATTACT ATGAGAAATT TCGACTACCG AGACGAAATC GTCACCAGCT GCGCACTTCG
AGCGAAGAAA GGGAGCGCAT TCTTTGTAAA AATTACGCGA TTGAATCTTC GTACGAAATA
CGACAAGCCC GCCGCAAGCT ACATCGGGTC CGAAGCACCA ACGCCAAATT GCACGAACAG
GTGAAAGAAA TGTTTTTTAA CGAGGCGCTT TTCAGTCAAT AG
 
Protein sequence
MQHEAPCLVG VGTFFRFALS VGDVCGRSRD DTVTFASKIH DPMAEGVLPN PITANKKTRS 
VSFDEIQIRN YNTIVGDHPL CMSGFPLSLG WEVDSTELYS VDYYEKFRLP RRNRHQLRTS
SEERERILCK NYAIESSYEI RQARRKLHRV RSTNAKLHEQ VKEMFFNEAL FSQ