Gene PHATRDRAFT_30154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_30154 
Symbol 
ID7195669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp160259 
End bp160993 
Gene Length735 bp 
Protein Length172 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183824 
Protein GI219127192 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.82692 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCATTTGAAT TGTGTAGAGC TGGCGCAAAA GAGTGAAGAA GCTACCGGAA AAATTCTTGA 
CTCAGATAAA GTGAATCAAT TGCTGCAGGC GCAACTAAAA GAAGTTTCCG CAAAACCGGC
GACCAGCCCT GTTTCGCATT CATCAATTCG TCCTAAATGG GAACCGACAT CATCTCACAG
ATTGGTAATG GAGTTTGAAT GGTTCGGACA GGATTTATCC GGTGTTTACA CCGGATGGAT
CAATGAAGAA AAGAATCCAG ATGGAATCGG AACGTTGCGT GTCGATGATG GGGCTGTTTA
CGATGGGAGT TGGAAAGGTG GAGAAAGGCA CGGAGAAGGT GTTTACGCTA CAATCGAGGG
GGATATCTTC CGTGGTGGCT GGTACGAAGA CAAGCATCAC GGTCCGAATT GTGTCTTTGT
TTGGTCGGAT GGACGTGTCT ATCAAGGAGC CTATTCACAC GGCGATCGGC ATGGTGAAGC
CATCATGACT TGGCCACACG GAGCAACATT TCGTGGGACG TTTTCGAACG ACAAACGTAA
CGGTCAGGGT ACTTATGTAT ACTCAGATGG TCGGTGCTAT AACGGAAACT ATCGAGACGA
GCGGCCCCAC GGATATGGTG TTTTGAAGGC AGCCGATGGT GAAACAATTA TATACGAAGG
TCAATGGGAG TTTGGAGAGT TTATCGGACC GGCAGAGATG AAGTAGAACA TGTACGCAAA
CAATATGTTG AACCT
 
Protein sequence
MEFEWFGQDL SGVYTGWINE EKNPDGIGTL RVDDGAVYDG SWKGGERHGE GVYATIEGDI 
FRGGWYEDKH HGPNCVFVWS DGRVYQGAYS HGDRHGEAIM TWPHGATFRG TFSNDKRNGQ
GTYVYSDGRC YNGNYRDERP HGYGVLKAAD GETIIYEGQW EFGEFIGPAE MK