Gene PHATRDRAFT_30140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_30140 
Symbol 
ID7195645 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand- 
Start bp45918 
End bp46604 
Gene Length687 bp 
Protein Length128 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183918 
Protein GI219127387 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GAGTTCTATC CACTAGTTGC GAGCGATGTC AGTAAACCTC GTTCCCGCAA CAAGCTGACT 
CGCAGATCGA TTTGCTTACA AAACCTTCCC GCGTCGCAGT TGCTTTGTTT CAACGAAAAA 
GCATACGAAA AGAAGAAACC TTCAAAAAGC TTGCCGCCCC CACCATTTTT GTGCTGCTCT 
CTTGGAATCA GGCGCTCCCA TTGTCACAAT ACCATGACGC CTACCGGTGA CGAAGCCGAA 
GTCCTGCGCC GTTTGGCAAA AACGATCAAT GGATTCCTAT CCCGACCGGA TTCTGGTCCA 
TTTCAGGAGC CGGTGGACTG GCGGGGTCTG GAGCTCTGGG ACTATCCCGA GATTGTGCCC 
AACATGATGG ACTTGGGGAC GGTCAAGCGC AAGCTCGACC GGGAACAGTA CGAAACTGCT 
TACGCTTGTG CCAGCGATGT ACGACTGGTT TGGAACAACT GCATGGCCTA CAATGCGGAA 
GGCTCCGATT TTTGGCTGCT GGCCAAGGCA TACAGCAAGC GATTCGAAGA TCGCTACCGA 
AAACTCAAGG CCGAATGTAA GTAGCCTCCC CCCGGTTAGC TTGGCATCTG CGAAAATATA 
CATCAGATAC ATCTAGTCTG ATTTGCTGTC CATATTGTTT ACAGTCAAAA TAGTCGAGGA 
GGAAACAGAA GAGGAGGATC AAGAAGT
 
Protein sequence
MTPTGDEAEV LRRLAKTING FLSRPDSGPF QEPVDWRGLE LWDYPEIVPN MMDLGTVKRK 
LDREQYETAY ACASDVRLVW NNCMAYNAEG SDFWLLAKAY SKRFEDRYRK LKAEFKIVEE 
ETEEEDQE