Gene PHATRDRAFT_23079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_23079 
Symbol 
ID7195559 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp401995 
End bp403033 
Gene Length1039 bp 
Protein Length259 aa 
Translation table 
GC content53% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183987 
Protein GI219127531 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.740425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AATCAACAAA AAAGCAAACA AAGTTATTCC AGCGTTAACC ATGGTACGTA AGCCGGCTTG 
GTTTCGAATG ACATTCCGTA CAGTCTCTTG ACCACAGAAT CTTACTTGTC GTGTTTGCTC
CTTTTGTGCA TCGATCAATC ACCAGGCACC CAAGAAAGGA ACCAAAAAGG GCGACGCCAA
GCCGAAAAAG GCGGTGGCCG ACCCGCTCTT TCCCTCCCGT CCGCGCAACT TTGGCATCGG
TAACGATATT CGCCCCGCCG GTCGCGATCT TTCGCGTTTC GTGCGATGGC CTCGTTACGT
CCGCATTCAG CGTCAGCGTG CGGTTCTCTA CCAGCGACTC AAGGTCCCTC CGGCCGTCAA
CCAGTTCACC AAGGTGATTG GCAAGAACGA AGCCATGACC GTCTTTACGC TGCTCAACAA
GTACCGCCCG GAAACTCCCG CCGCCAAGAA ACAGCGTATC AAGGAAGCCG CTGCTGCTGG
TGGAAAAGAT GCCGGTAGCA AGGCCCCGCA TCAAGTCAAG TACGGACTCA AGCATATTAC
CACGTTGGTG GAAGAAAAGA AAGCCCAGCT TGTGTTGATC GCCAACGACG TTGATCCCCT
CGAGCTTGTC ATGTGGTTGC CTGCCCTCTG CCGCAAAATG GGAGTCCCCT TTATGATTGT
CAAGGACAAG GCTCGTCTCG GAGCCTTGGT GCACATGAAG ACGGCTGCCG CGGTGGCTTT
GACTGGTGTC GACAAAGCGG ACGAAAAACA GCTCGAACTG CTCAAGTCCC TCGGTACCGA
AAAGTACAAC GACAATCCGG AACTGCTCCG CAAGTGGGGA GGTGGTAAAA TGGGTCTCAA
GACTCAAGCC AAACTCGACA AGCGTGCCAA GGCCGTGGCC ATTGAAGAAG CCAAGAAGTT
GGCCTCTTTG GGACGCGCCT AATTGGACAG CCAACCGCAT GGTTGTGACG CTCTTTGTAA
CGATAGACTA TACATACCAG TTGAGACTGT TGACACTGTT GCCCCGGCAC AGTCGAGGTT
ACACTTAAAT GCCTTTGTT
 
Protein sequence
MAPKKGTKKG DAKPKKAVAD PLFPSRPRNF GIGNDIRPAG RDLSRFVRWP RYVRIQRQRA 
VLYQRLKVPP AVNQFTKVIG KNEAMTVFTL LNKYRPETPA AKKQRIKEAA AAGGKDAGSK
APHQVKYGLK HITTLVEEKK AQLVLIANDV DPLELVMWLP ALCRKMGVPF MIVKDKARLG
ALVHMKTAAA VALTGVDKAD EKQLELLKSL GTEKYNDNPE LLRKWGGGKM GLKTQAKLDK
RAKAVAIEEA KKLASLGRA