Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_23079 |
Symbol | |
ID | 7195559 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 401995 |
End bp | 403033 |
Gene Length | 1039 bp |
Protein Length | 259 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183987 |
Protein GI | 219127531 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.740425 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | AATCAACAAA AAAGCAAACA AAGTTATTCC AGCGTTAACC ATGGTACGTA AGCCGGCTTG GTTTCGAATG ACATTCCGTA CAGTCTCTTG ACCACAGAAT CTTACTTGTC GTGTTTGCTC CTTTTGTGCA TCGATCAATC ACCAGGCACC CAAGAAAGGA ACCAAAAAGG GCGACGCCAA GCCGAAAAAG GCGGTGGCCG ACCCGCTCTT TCCCTCCCGT CCGCGCAACT TTGGCATCGG TAACGATATT CGCCCCGCCG GTCGCGATCT TTCGCGTTTC GTGCGATGGC CTCGTTACGT CCGCATTCAG CGTCAGCGTG CGGTTCTCTA CCAGCGACTC AAGGTCCCTC CGGCCGTCAA CCAGTTCACC AAGGTGATTG GCAAGAACGA AGCCATGACC GTCTTTACGC TGCTCAACAA GTACCGCCCG GAAACTCCCG CCGCCAAGAA ACAGCGTATC AAGGAAGCCG CTGCTGCTGG TGGAAAAGAT GCCGGTAGCA AGGCCCCGCA TCAAGTCAAG TACGGACTCA AGCATATTAC CACGTTGGTG GAAGAAAAGA AAGCCCAGCT TGTGTTGATC GCCAACGACG TTGATCCCCT CGAGCTTGTC ATGTGGTTGC CTGCCCTCTG CCGCAAAATG GGAGTCCCCT TTATGATTGT CAAGGACAAG GCTCGTCTCG GAGCCTTGGT GCACATGAAG ACGGCTGCCG CGGTGGCTTT GACTGGTGTC GACAAAGCGG ACGAAAAACA GCTCGAACTG CTCAAGTCCC TCGGTACCGA AAAGTACAAC GACAATCCGG AACTGCTCCG CAAGTGGGGA GGTGGTAAAA TGGGTCTCAA GACTCAAGCC AAACTCGACA AGCGTGCCAA GGCCGTGGCC ATTGAAGAAG CCAAGAAGTT GGCCTCTTTG GGACGCGCCT AATTGGACAG CCAACCGCAT GGTTGTGACG CTCTTTGTAA CGATAGACTA TACATACCAG TTGAGACTGT TGACACTGTT GCCCCGGCAC AGTCGAGGTT ACACTTAAAT GCCTTTGTT
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Protein sequence | MAPKKGTKKG DAKPKKAVAD PLFPSRPRNF GIGNDIRPAG RDLSRFVRWP RYVRIQRQRA VLYQRLKVPP AVNQFTKVIG KNEAMTVFTL LNKYRPETPA AKKQRIKEAA AAGGKDAGSK APHQVKYGLK HITTLVEEKK AQLVLIANDV DPLELVMWLP ALCRKMGVPF MIVKDKARLG ALVHMKTAAA VALTGVDKAD EKQLELLKSL GTEKYNDNPE LLRKWGGGKM GLKTQAKLDK RAKAVAIEEA KKLASLGRA
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