| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_23077 |
|---|
| Symbol | |
|---|
| ID | 7195551 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011689 |
|---|
| Strand | + |
|---|
| Start bp | 395837 |
|---|
| End bp | 397161 |
|---|
| Gene Length | 1325 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183865 |
|---|
| Protein GI | 219127277 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.182131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | AAAACCGAAG TTCTGCCTTT CACTGTCCGC AAGCTTAAGC AAAAACTCCT CCTGATAGCG
TCTTAGAAGC AGCTCAATAC TACTACATCG ACACTTTAGC ACAACTACTG AACAGCACTC
GGTAGAAGAG TCGTTCGCTG GGAGCTACAA TGACGGGTGA CGAAGCGTCT TCACCTACTC
TTACCGCGAC GCCTTCGAAA AAGCGGGCTT TCGTTTCTGC TCCTCCTGAT AGAGGCGGCT
ACCATAACTT GAGTCTGTAT GGTGAACACA AACGCGCTGT TTCTTCCGTC AAGTTTGCTC
CGGATCGCTT ATGCAAGAGC TCTCATGCCT TGTGTGCTTC CGCGAGCGCG GATGGTTCCG
TAAGGCTGTG GGATCTGTCG CAGGATATGT ACGAAAGCCT CCCAACGATG ACAACTTCGA
CGACTGTCGT GGGGGATGCG CCGCTCGCAT CCGCTACTAA ACAGCTGCAA CCGGTAGTCA
CTTGCCTCGG GCATTCGCGA GGCATCAACG AAGTGTGTTG GAATCCCACA TCCCCTCTAC
TCGCGACCGC TAGCGACGAC AAAACCATTC GCGTGTGGGA CGCTGTCACG GGTGACGCGC
TCGTGGAATT TCGTGGCCAC GACAATTTTG TCTTTTGTGT CGATCAGAAG CAATCCATGT
TGGTGTCCGG TTCATTCGAC GAAACGGTCA AACTCTGGGA CGTTCGTTCG GGTGAGTGTG
TAAGTACACT GCCCGCGCAC TCGGACCCAG TCACGGCCGT TTCCTTCAAT CGGGACGGAA
CCTGTGTCTG CAGCGCCTCG CACGATGGCT TGATCCGTAT ATGGGACGTG GCGACGGGTG
AATGCCTGAA AACAATTTAC GCTGCTAAAA ATCCGCCTGT TTCGCACATC ACCTACAGCC
CCAACGGTAA ATACGTATTG GCGGGAACGC TGGATTCAAT GCTACGTTTG TGGCCGGTGA
ACCGGATTGG CAGCAGCAAA TGCGCCAAAA CATACCAAAG TGAGCTGCAT CACGTTAACA
ACAAGTACTC GGTTGTGTCA ACGTTCACGT ACGATGGGAA TATTGTGACG GGAAGCGAAA
CGGGCAAGAT TTGTTTGTAT GATTTGCAAT CTCGACAAAT TCAGCAAGTG CTGGAATGTC
ACGAAGGACC TGTCTTGGCA GTGGCCGCCC ACGACAAGTT GCCTCTGCTG GCTTCGGGCG
GCATGACGGC CGACCGGCGG GTCGAATTTT GGGCTAAACC GCCGCAAGGG ATGGATGGGC
AACCCGCAAT CAAGAGAGCG AGAGACTAAG TTTCAGCTGT ATTCTATAGA GCTGTCTCAC
TGTAT
|
|---|
| Protein sequence | MTGDEASSPT LTATPSKKRA FVSAPPDRGG YHNLSLYGEH KRAVSSVKFA PDRLCKSSHA
LCASASADGS VRLWDLSQDM YESLPTMTTS TTVVGDAPLA SATKQLQPVV TCLGHSRGIN
EVCWNPTSPL LATASDDKTI RVWDAVTGDA LVEFRGHDNF VFCVDQKQSM LVSGSFDETV
KLWDVRSGEC VSTLPAHSDP VTAVSFNRDG TCVCSASHDG LIRIWDVATG ECLKTIYAAK
NPPVSHITYS PNGKYVLAGT LDSMLRLWPV NRIGSSKCAK TYQSELHHVN NKYSVVSTFT
YDGNIVTGSE TGKICLYDLQ SRQIQQVLEC HEGPVLAVAA HDKLPLLASG GMTADRRVEF
WAKPPQGMDG QPAIKRARD
|
|---|
| |