Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_15815 |
Symbol | |
ID | 7195544 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | + |
Start bp | 365503 |
End bp | 367746 |
Gene Length | 2244 bp |
Protein Length | 644 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183861 |
Protein GI | 219127269 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGAAATGACC TCATGAACAA GATCTCCGAT CAGATCAAGT CCGGTGCCAG AGCCTTTCTG ACCACTGAGT ACAAGTACCT GTCAGGCTTT GTGGCTGTCG TGTTTAGCGT CCTACTTGTC CTCTATACCC TCGATCCCCC GTCCGGTGAC AAGACAGACG GTATCCGCTA CGCATCCTGT TTCCTCTGCG GTGCCGTCCT TTCCGCCTCG GCTGGATGGG GTGGAATGGC GGTGGCAACG GACGCCAACG TCCGTACTAC CCAAGCCGCC GATACGGAAG GTCTCGGGGT CGCGCTTCGC GTCGCCTTTA CCGGTGGGGC CGTCATGGGA TTCACGGTAG TTGGTCTCGG TCTGTTGGGT CTTTCCATCA TGTTTTACCT GGTGACGTTC GGATTCGATG ACGCTGACAA AGGAATCGCT TCTGGCACGT CGCCCAGTCT AGAAGAGCGC CTCCGCTTTG GCGCGGACGT GATAGCCGGA TTCGGTTTCG GTGCCTCAAG CATTGCCCTC TTTGCTCGAG TAGCTGGAGG AATCTACACG AAGGCCGCCG ATGTGGGTGC CGATCTTGTG GGCAAGGTTG AGATGGACAT TCCCGAAGAC GATCCCCGTA ACCCTGCTGT GATTGCCGAT AACGTCGGCG ACAATGTCGG GGATGTTGCT GGTATGGGAG CTGATTTGTT CGAGTCGTTT GTAAGTTTTT GCAACTGTCT CTCTTGCGTG TGCTGAAACA CTACCGCTTT GGTTCGTTTC TCATTTCTTA CGTTGCGGTC ATTCTTTGTC ATTCTAGGTT GGATCCATCA TTGCTGCTAT CACTCTCGCC AACGGCGATA TCACACTCAT CATGCTCCCG TTTTGGATTT CTGGAGCTGG TATCATTGCT GCTATTATTG GATTCTTCGC AGTCAGCTGC AAGGATGATG CTGGTCAGAA GGAACTCATG TTTGCCCTCC ACAAGTCCAC CATTGTTTCC TCAACCTTGG TAGTCGGTTT CAGTGCACTG ATCGTTGCCT TCCTATTTGA TGGGCGATCC AAGGAAGGAT GGGAAGTCTT TGGATGCATT GTCATTGGTC TCGTGGCGGG TGTTCTCATT GGACAAGTGA CGGAATACTT CACATCCTAT TCGTACTGGC CTACCAAGTC CATTACAGAT GCTGGTGTTA CCGGACCCGC TACCGTCATT ATTCAAGGCC TCGGTGTTGG CATGATTTCT ACCGTCTTCC CAGTCATTAT CATCGTTGCT ACCATTCTTG GATGTAACGC GTTATCTGGT GAATACGGTA TTGCCTTGGC TGCCGTTGGT ATGCTTTCCA CTTTGGGCGT GACTCTCGCT ACGGACGCGT ACGGTCCGAT TGCTGACAAC GCTGGAGGTA TTGCCGAAAT GGCCGAGCTG GAAGAACGCG TCCGCGACAC AACTGACGCT TTGGATGCTT TGGGTAACAC CACTGCTGCT ACCGGTAAGG GATTTGCTAT CGGATCTGCT GTGCTTACGG CATTGTCGTT GCTTTCTGCC TTTACTGATA AGGCCGGCTT GGGCAACGTC AACGTCGACA TCGGTGAACC TGTTGTGCTT GCGGGAGTTT TGATTGGAGC CATGCTTCCT TTCTTGTTCG CTGCCTTGAC TATGCTTTCA GTGCAAAAGG TATGTCTTTG GAACATTCGA GCAAATAGCA TCTTTGACGA GCATTGATTT ATTAACCTTT TGTTTGTGAA TTTGTAGGCT GCTGGAGCCA TCATTATTGA AGTCCGTCGA CAGTTCGCCG AGATCCCTGG ACTCCGCGAA GGAACTGCTG AAGCCGATTC GGACAAGTGT GTTGCGATCT CTACGCAGAG TTCTGTTGAA GAAATGGTAC TCCCTGGAAT TTACGCTATT CTTTCGCCAA TCACCGTCGG CTTTCTCATT GGGCCTCGCT GCTTGACCGG TCTTCTCGGA GGAGCGATTG CTTCTGGTAT GATGCTGGCA CTCATGATGG TACGTACATT GCTATTTAAA AGTGTAAAAC AACTTAGGGG TCGCTAATGT AAACATCGTT CCATTTACAG GCAAATGCTG GTGGAGCTTG GGACAACTCC AAGAAGTACA TCGAAATTGA GGGTGCCAAG GGAGGAAAGG GAACCGAAAC GCACAAGGCC TGCATTGTTG GTGACACTGT CGGAGATCCT TTTAAGGATA CCAGTGGCCC GTCCCTTAAT ATTCTTATCA AGCTCATGAG CATTATCTCA CTCACCATCG CGCCGTTGAT GGAG
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Protein sequence | GNDLMNKISD QIKSGARAFL TTEYKYLSGF VAVVFSVLLV LYTLDPPSGD KTDGIRYASC FLCGAVLSAS AGWGGMAVAT DANVRTTQAA DTEGLGVALR VAFTGGAVMG FTVVGLGLLG LSIMFYLRLR FGADVIAGFG FGASSIALFA RVAGGIYTKA ADVGADLVGK VEMDIPEDDP RNPAVIADNV GDNVGDVAGM GADLFESFVG SIIAAITLAN GDITLIMLPF WISGAGIIAA IIGFFAVSCK DDAGQKELMF ALHKSTIVSS TLVVGFSALI VAFLFDGRSK EGWEVFGCIV IGLVAGVLIG QVTEYFTSYS YWPTKSITDA GVTGPATVII QGLGVGMIST VFPVIIIVAT ILGCNALSGE YGIALAAVGM LSTLGVTLAT DAYGPIADNA GGIAEMAELE ERVRDTTDAL DALGNTTAAT GKGFAIGSAV LTALSLLSAF TDKAGLGNVN VDIGEPVVLA GVLIGAMLPF LFAALTMLSV QKAAGAIIIE VRRQFAEIPG LREGTAEADS DKCVAISTQS SVEEMVLPGI YAILSPITVG FLIGPRCLTG LLGGAIASGM MLALMMANAG GAWDNSKKYI EIEGAKGGKG TETHKACIVG DTVGDPFKDT SGPSLNILIK LMSIISLTIA PLME
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