Gene PHATRDRAFT_15768 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15768 
Symbol 
ID7195499 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp625677 
End bp626391 
Gene Length715 bp 
Protein Length187 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002184035 
Protein GI219127630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGACAC TCTGGATGAC GGCACTCACG GATCCAGGCA TTGTACCCTC GGTTTCAAGC 
CCGGCCAAAC CACCCGTGCC ACTCATGACC GACGAAAACG GCCTGGATGT GGCGGTTCCT
ATTGGTGGGC CTTTGGGATA TCGCTATTGC TCGACCTGTA ACATTTTTCG ACCGCCAAGA
TCCAAGCACT GCAATTCGTG CAATGTTTGC GTTTCCAAAT TTGATCACGT AAGTGTCACG
TACCGCCGGA GGCGAATTAG TCCGTGTTTT TTTGATTGCC ACCCATAGCC ATTCACTGAT
CAACTCTTTT TGTTGACAGC ACTGTCCATG GACCGGTTCC TGCATTGGTG AACGCAATCA
CCGAGCATTC TTTGCATTTT TGTGCTTTAT CAGCGGTTTG ACAATTCTAG TCACGGCGGC
GGCCTTACGG CTTTTTTTGG GCGCCTACCA AATCATGTCC GTAGCCGACA GCCCGGGGAT
AGGGCCCGTG TACCGAATCA ACGTGACAGA CTTTCCCAGC GTTGCGGAAT ACGGAGAGCG
CACCTCTCAT CGCCTCTGGC AGGCAATGCT AAGCATGCCT ATGACGGTTT TGTTTGGAAC
CTTTACTCTA CTCTGTTCCT GGTCGTTGGT CTCCTTATTG TTTTACCACG CTGTCCTCGT
TTCCGTTTCG CAAACTACCA ACGAAAGAGT ACGGGGTGTA TACCGATACG GATCG
 
Protein sequence
MVTLWMTALT DPGIVPSVSS PAKPPVPLMT DENGLDVAVP IGGPLGYRYC STCNIFRPPR 
SKHCNSCNVC VSKFDHHCPW TGSCIGERNH RAFFAFLCFI SGLTILVTAA ALRLFLGAYQ
IIVAEYGERT SHRLWQAMLS MPMTVLFGTF TLLCSWSLVS LLFYHAVLVS VSQTTNERVR
GVYRYGS