Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_15730 |
Symbol | |
ID | 7195699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011689 |
Strand | - |
Start bp | 316869 |
End bp | 318197 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | |
GC content | 49% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183967 |
Protein GI | 219127490 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0024811 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GATCCCAATC GTGTCAAGAT TACCACGATG CCAGTGAGCG GCCGTGCTGC GGAAGATATT GTACAGGAAC TCCAGCACTT CGCCGAGAAG GAAGACAAGA TGTGGCAACT TGGCAAAGTG AGTGGCACAG TCTATTCCAA TAGCGACGAG CACACATCGT TGATGAATCG TGTATACGCT GCATACTCCT GGAGTAATCC GTTACATCCA GGAATATGGC CTAAACTGAA TCAGTGCGAA GGCGAAGTAA TTGCCATGAC GGCCGACATG TTACACGCGC CGCCAATTGG ATCGATGACA TCGGGTGGCA CTGAAAGTAT CATTCTAGCC ATCCGAGCGC ACTGGAATGT ATACGGAAAG CGGCGGGGTA TCAGGCATCC GGAGCTAGTT TGTGGAACCA CTGCTCATGC GGCTGTCTAC AAAGCGTGCG ACATGTTTGG CATTCGCGTG GTGAGTATAG ATTGCAATCA CCGACACGAT TCCTTCCAAT TGAACCCAGA TCGCGTTTCC AAAGGTATCA CTTCCAATAC CATTATGATA TATGCCTCCG CTCCGTCCTA TCCTCAGGGC GTTGTGGATC CCATTGAAGC CTTGTCCAAA ATTGCTTTGC GGTACAAAGT CGGCCTGCAC GTGGATGCTT GTCTAGGTGG ATTTGTTTTA CCATTTGTCG ATGATGCACC CGTCTTTGAT TTTCGAAATC CCGGTGTCAC TAGTATGAGT GCAGATACCC ACAAGTATGG ATATGCTAGC AAGGGCACAA GTATCGTTCT ATATCGCGAC AACACGCTTA GACATGGGCA GTACTTTTCC TATTCGTGGT GGACTGGTGG CTTGTATTCA ACGCCAACCA TTGCTGGATC TCGACCGGGA GCGTTGTCGG CCTGTGCTTG GGCTGCTCTT GTTTCCCTTG GAAAAGACGG GTACAGGGAA CGCTCTCACT TGATTGTCAA CGCGGCCCGG GCAATTGCCG ATGGAATTCA ATTAGTGCGT GGTGTAAAAT TGCTCACGCC CAAGCCGTTT ATGGTCGTCT CTTTTACTTC TAATGAGATG GACATTTACA GGATTCAAGA CTACATGACC AAAGCAGGCT GGAATTTGAA TGCCCTTCAG TCACCTGCAA GCGTTCACAT CTGCGTTACA TTGAATGTGG TGCCAAAAGT GGACAGCTTT TTGCGAGATC TCAAAATGTC GATTAATCAA GTTCGAAATG AAGGGAAAGG AGGACGAAAG AAAGGCACGG CAGGTGTGTA TGGTACGGTC GGTTCCCTGC CAGCTGGTCC AGTTGATTAT TCTCTTCGAG CATTCACGGA TTTAACTCTG GAGCCTTAG
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Protein sequence | DPNRVKITTM PVSGRAAEDI VQELQHFAEK EDKMWQLGKV SGTVYSNSDE HTSLMNRVYA AYSWSNPLHP GIWPKLNQCE GEVIAMTADM LHAPPIGSMT SGGTESIILA IRAHWNVYGK RRGIRHPELV CGTTAHAAVY KACDMFGIRV VSIDCNHRHD SFQLNPDRVS KGITSNTIMI YASAPSYPQG VVDPIEALSK IALRYKVGLH VDACLGGFVL PFVDDAPVFD FRNPGVTSMS ADTHKYGYAS KGTSIVLYRD NTLRHGQYFS YSWWTGGLYS TPTIAGSRPG ALSACAWAAL VSLGKDGYRE RSHLIVNAAR AIADGIQLVR GVKLLTPKPF MVVSFTSNEM DIYRIQDYMT KAGWNLNALQ SPASVHICVT LNVVPKVDSF LRDLKMSINQ VRNEGKGGRK KGTAGVYGTV GSLPAGPVDY SLRAFTDLTL EP
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