Gene PHATRDRAFT_15730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15730 
Symbol 
ID7195699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011689 
Strand
Start bp316869 
End bp318197 
Gene Length1329 bp 
Protein Length442 aa 
Translation table 
GC content49% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183967 
Protein GI219127490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0024811 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GATCCCAATC GTGTCAAGAT TACCACGATG CCAGTGAGCG GCCGTGCTGC GGAAGATATT 
GTACAGGAAC TCCAGCACTT CGCCGAGAAG GAAGACAAGA TGTGGCAACT TGGCAAAGTG
AGTGGCACAG TCTATTCCAA TAGCGACGAG CACACATCGT TGATGAATCG TGTATACGCT
GCATACTCCT GGAGTAATCC GTTACATCCA GGAATATGGC CTAAACTGAA TCAGTGCGAA
GGCGAAGTAA TTGCCATGAC GGCCGACATG TTACACGCGC CGCCAATTGG ATCGATGACA
TCGGGTGGCA CTGAAAGTAT CATTCTAGCC ATCCGAGCGC ACTGGAATGT ATACGGAAAG
CGGCGGGGTA TCAGGCATCC GGAGCTAGTT TGTGGAACCA CTGCTCATGC GGCTGTCTAC
AAAGCGTGCG ACATGTTTGG CATTCGCGTG GTGAGTATAG ATTGCAATCA CCGACACGAT
TCCTTCCAAT TGAACCCAGA TCGCGTTTCC AAAGGTATCA CTTCCAATAC CATTATGATA
TATGCCTCCG CTCCGTCCTA TCCTCAGGGC GTTGTGGATC CCATTGAAGC CTTGTCCAAA
ATTGCTTTGC GGTACAAAGT CGGCCTGCAC GTGGATGCTT GTCTAGGTGG ATTTGTTTTA
CCATTTGTCG ATGATGCACC CGTCTTTGAT TTTCGAAATC CCGGTGTCAC TAGTATGAGT
GCAGATACCC ACAAGTATGG ATATGCTAGC AAGGGCACAA GTATCGTTCT ATATCGCGAC
AACACGCTTA GACATGGGCA GTACTTTTCC TATTCGTGGT GGACTGGTGG CTTGTATTCA
ACGCCAACCA TTGCTGGATC TCGACCGGGA GCGTTGTCGG CCTGTGCTTG GGCTGCTCTT
GTTTCCCTTG GAAAAGACGG GTACAGGGAA CGCTCTCACT TGATTGTCAA CGCGGCCCGG
GCAATTGCCG ATGGAATTCA ATTAGTGCGT GGTGTAAAAT TGCTCACGCC CAAGCCGTTT
ATGGTCGTCT CTTTTACTTC TAATGAGATG GACATTTACA GGATTCAAGA CTACATGACC
AAAGCAGGCT GGAATTTGAA TGCCCTTCAG TCACCTGCAA GCGTTCACAT CTGCGTTACA
TTGAATGTGG TGCCAAAAGT GGACAGCTTT TTGCGAGATC TCAAAATGTC GATTAATCAA
GTTCGAAATG AAGGGAAAGG AGGACGAAAG AAAGGCACGG CAGGTGTGTA TGGTACGGTC
GGTTCCCTGC CAGCTGGTCC AGTTGATTAT TCTCTTCGAG CATTCACGGA TTTAACTCTG
GAGCCTTAG
 
Protein sequence
DPNRVKITTM PVSGRAAEDI VQELQHFAEK EDKMWQLGKV SGTVYSNSDE HTSLMNRVYA 
AYSWSNPLHP GIWPKLNQCE GEVIAMTADM LHAPPIGSMT SGGTESIILA IRAHWNVYGK
RRGIRHPELV CGTTAHAAVY KACDMFGIRV VSIDCNHRHD SFQLNPDRVS KGITSNTIMI
YASAPSYPQG VVDPIEALSK IALRYKVGLH VDACLGGFVL PFVDDAPVFD FRNPGVTSMS
ADTHKYGYAS KGTSIVLYRD NTLRHGQYFS YSWWTGGLYS TPTIAGSRPG ALSACAWAAL
VSLGKDGYRE RSHLIVNAAR AIADGIQLVR GVKLLTPKPF MVVSFTSNEM DIYRIQDYMT
KAGWNLNALQ SPASVHICVT LNVVPKVDSF LRDLKMSINQ VRNEGKGGRK KGTAGVYGTV
GSLPAGPVDY SLRAFTDLTL EP