| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49115 |
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| Symbol | |
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| ID | 7195198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | + |
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| Start bp | 628449 |
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| End bp | 631061 |
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| Gene Length | 2613 bp |
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| Protein Length | 870 aa |
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| Translation table | |
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| GC content | 48% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183644 |
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| Protein GI | 219126815 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00818275 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACTA TCAGGCCAGT TGGTATCCTC CGTCGCCCTT CCCGTTATCT CTTCACCAAA
ATATGCCCGA TGCTCTTGCT TGCCCTTTTT TTCGTCTTGC AAACCATCAT ATTGAAATGG
TATCAAGCTC GTGCCGGCAT TATCAACAAC TACCGGACGG TATATTTGAC AACAAAGGCA
TGTGATCCAC ACTGTAATTC TGGGATTTCG GATATTATCA TTGGCACAAA CACCAGAAAG
ATTGCTGACT TAATGGATAG CGGTTACCTC CCTGCCTCAC TCGGCACGAG TAAGAGCAGC
TCGACAATTC CTGTCAATCT CGTGAAGGGA AATGGGGAGG GGACGATTCA GCCCGTGTCT
ATGATACTGC TACGTGCCAT AGGAAATGCC CTTCCGCCAC GTCATAGCTC AGAACAAACG
CTCTTGAATG TGGACTTTAT TCTTCAGCAC GAGGAAACCT TCCCAAATAC GTCTCGGCAC
TGGTTCCTCA ACAGGCTTGT GGATCCACAC ATAGAGTGGC AAGTTGTGCA AAAACTTCAG
CGAGCAAATG AATCCTTCAC TATCATTCCC TTCGACTTGA AAGTCTATGG CTCCCTTTCG
TATCGTTTCG ATCTGTTCGA ATTTGCCGAC CAAATTCATT CGGCTCACAC TGATGCATCT
AGGGGATCGG GGCGTCGAAA GATGGCCGAG GAGCGCATGT TTCACGATAA ACTGCTCTAC
ACTGCCAACG TCAATGGAGT GCGCAATGAA ATGCTCAGAT ATGGCAAGCT GCGAAGTTCT
GCAGACTACA TTCTTCCATT CGACGGCAAC TGCTTCCTCA CTCGCAAAGC TTGGGAGGCT
ATTCAACGGG ATATACTCAG CAATCCGAAG GTCAAATACT TTGCCGTACC GATGGATCGC
CTCGTTGAGG AAAATACAGC ACTCTTGTTG AGCTCATACA AGCCAAATCC AGTTGAAGAA
CCCCAACTTA TCTTCCATCG ACGATCTGTC GCTATTTTCA ATCCGAACTT GCCTTACGGG
CGTCGCAACA AAGTCGAGCT ATTGCTTCGG TTAGGGATTG TAGGCGCATG GCACAAATCC
CACAAAAACA AGTGGGACCA CAAGCTTGAA CGGTCTCATC CAATTGTGGA CATAAAACCA
GATTCGATCG CGACCGCAAC TGGTACAGCT GGCTGGGTAT CTCGATTATA TTCCGGCAAT
AAAAATGCGG AACTTTCAGA CCATGGCACT GCTACCACTC GAGCCAGCCT ACGTCGCACA
GCGATATCAA ATTTACTCGA CCGATTGGAC TTGCGTGCAG CTGTGAACTT GTACAATTTC
ACTTCACATA CCATGCTCTT CTATAACATG CAGCAGGTAA ATTCGTTACG GTTGCAATGG
CAGAGTGGCC AGCTGCAAGC TCCAATGATA AGAAGGCTTA TGGAGTTGGC TTCCAACTTT
CTGAACGAGG GCCCTTGGTC TGTTCTTAAC ACAATTCCGT TCGGCTGTGG CCCTTCTCAA
AACTTTCATG ACGGCGACTA TACCCGGCCA CTTAATTGGC CTCAGAGCAA CGAGTCCAGC
TACAGCAATT GGTCAAGATT CTACCTTTCG AAATATGGAA AGAGCATTCC TGGAAGTGCC
GTGTACAGCG AAGGAAGTGA TCAGTTTGAT CGCACACAAT TCAACTCGAT GCAGCAGAGG
ACAACTGTTC TGGCACTTGC CTACGCAATA TCAGGGAAAC AATCTTATGT ACAAGAAGCA
GCCGAAAATC TTCGTGTACG GTTTCTTGAC CCGAAAACCA AAATGAACCC AAACTTCACT
TGTAGTCGAG GTATGTGGGA AGGCAACCCA CCCAAATATG TGAAAAATAC GTTTGGCACG
TCCGAAATGA ACGGAATGTA TTTCTTTCTT GACGCCGTGA GGATTGTGGA GACTTCCGGA
GCCTTATCGA CCACGGAGAT AGACAAACTG CATATTTGGT TTCGCGACTA TCTTCTATGG
CTGGTTGAGA CCAACGGACC AGATCAGGAT ATAATGATTG GGGAAAGCCA AAGCGATGTG
CCCGACAACT TTGCACCAAA CCATCGCGGT CTGTACTTCG ATATACAGCT AGCATCTGTT
GCAGCATATT GTGGTAACTT GACCTTGGCA GTCCACACGT TGCACCGGAC CTTGGCTCGA
CTAGATGCGC ACGTCAACTC TATCGGTGCG ATGCGACAAG AGGCATGTGG AGACCGTAAC
TGTGAAGACT TTATTGCCTT TGCAATTAAT GGATGGTCAG TAGCTGCTCG TATCGCTTCC
TCAGTTGGGA TCAACTACTG GTGGCGCTTT CCGGTTGGAA AACAATCCAA GCTCTGTCTT
GCTATGGAAT ATAACAGTTT TCTCCTGCGC AATCGAGATC CCTGTGCACA AAGTAATACT
GTGGGAGACA ATACTGCCAC CCGATGGTGG CCGCTCCTGT TTGAAGCCAA GCTACACTGT
CCTCACTCGG AGATACAACA TAGCAGCTCC TCTTCGCCGG AGATTTTTGG CGGCTCAAGA
TGTCATCACC CGGCTTTAAG CGGCGAGGTA GCGCCCTTTT GGAATTTGAA TTTGCCAACT
GACAAGCAAC ACGGGTACTC AAAGAAACTG TAG
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| Protein sequence | MKTIRPVGIL RRPSRYLFTK ICPMLLLALF FVLQTIILKW YQARAGIINN YRTVYLTTKA
CDPHCNSGIS DIIIGTNTRK IADLMDSGYL PASLGTSKSS STIPVNLVKG NGEGTIQPVS
MILLRAIGNA LPPRHSSEQT LLNVDFILQH EETFPNTSRH WFLNRLVDPH IEWQVVQKLQ
RANESFTIIP FDLKVYGSLS YRFDLFEFAD QIHSAHTDAS RGSGRRKMAE ERMFHDKLLY
TANVNGVRNE MLRYGKLRSS ADYILPFDGN CFLTRKAWEA IQRDILSNPK VKYFAVPMDR
LVEENTALLL SSYKPNPVEE PQLIFHRRSV AIFNPNLPYG RRNKVELLLR LGIVGAWHKS
HKNKWDHKLE RSHPIVDIKP DSIATATGTA GWVSRLYSGN KNAELSDHGT ATTRASLRRT
AISNLLDRLD LRAAVNLYNF TSHTMLFYNM QQVNSLRLQW QSGQLQAPMI RRLMELASNF
LNEGPWSVLN TIPFGCGPSQ NFHDGDYTRP LNWPQSNESS YSNWSRFYLS KYGKSIPGSA
VYSEGSDQFD RTQFNSMQQR TTVLALAYAI SGKQSYVQEA AENLRVRFLD PKTKMNPNFT
CSRGMWEGNP PKYVKNTFGT SEMNGMYFFL DAVRIVETSG ALSTTEIDKL HIWFRDYLLW
LVETNGPDQD IMIGESQSDV PDNFAPNHRG LYFDIQLASV AAYCGNLTLA VHTLHRTLAR
LDAHVNSIGA MRQEACGDRN CEDFIAFAIN GWSVAARIAS SVGINYWWRF PVGKQSKLCL
AMEYNSFLLR NRDPCAQSNT VGDNTATRWW PLLFEAKLHC PHSEIQHSSS SSPEIFGGSR
CHHPALSGEV APFWNLNLPT DKQHGYSKKL
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