| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_49114 |
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| Symbol | |
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| ID | 7195336 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011688 |
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| Strand | + |
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| Start bp | 624480 |
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| End bp | 626496 |
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| Gene Length | 2017 bp |
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| Protein Length | 527 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183643 |
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| Protein GI | 219126813 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.024249 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCTTTCGTCC CTGCCCCAAA CACTCGAAAA AACTCCGTCC ATCTCTCAGT ATGGAACAAG
CGTATATCAG TGAAGGCACT TCGATCGATA AGGTACGCAC ACTCGTCGTC TGGCGGTGGA
TGGTCCGAGC AGAGAGCCTA GTGGACAAGT GCCCACGACA TTGTCGCGCG TAGGGTTGTC
CACGGAATCC GTCGGATTTC TCTTGGTGCA CCTGATGTCA TGTAGAACAT TCCGGATTCC
ACTATTTCAC TACTTATTTT CTTATAAATC TCTCACGATA CGGAATCTCG TTTTCGTTGG
CAATCGGATA CGACTCACAC CCTTTGGATT TTTTTTTCTT TTGGTTCCTC TCCAGGGCGA
AAACGCTCGT CTGAGTTCCT TCGTCGGTGC CATTGCGATT GCCGATCTCG TCAAGACGAC
GTTGGGACCC AAAGGATTGG ACAAGATCCT CCAAAAGGTG GATCCGCACG ATCAGAGTAT
TTCCGTCACC AACGACGGTG CCACCATTCT CCGCTCCGTA CACGTGGACA ACGCCGCCGC
CAAGGTCCTC GTCGACATTG CCCGGGTCCA AGACGACGAA GTCGGCGACG GGACGACTTC
CGTCGCGGTG CTCTGCGGAG AACTCTTGCG GGAAGCTGAA CAGCTTGTCA CGCAGCGAAT
CCACCCCCAG ACGATCTGTG CCGGATGGCG TCTGGCCCGA CAAGTGGCAC GCCAAGCCCT
CCTCGACGCC TCCCAACAAG CCACCGACGA GGACGTCTTC CGCGAACAAC TCTTGCAAAT
CGCCACCACT ACTCTCAGTA GCAAATTGCT CACGCACGAA AAGGCGTACT TTGCCAATCT
CGCCGTCGAC GCCGTCCTCC GACTCAAGGG CAGTCGCAAT CTGGAACACA TTCAGGTTTT
GAAAAAAGCC GGTGGCGTCC TCCGGGACAG CTATCTCGAA GAAGGATTCC TGCTCAACAA
GACCGTCGGG ACGGGACAAC CCAAGCGCGT GGAACACGCC AAAATTCTCG TCGCCAACAC
ATCCATGGAT ACGGATAAAA TCAAAATTTA CGGATCCCGG GTCAAAGTGG ACAGCATCGA
TAAGATTGCC TCCATCGAAC AAGCCGAAAA GGCCAAGATG AAGGACAAGG TGGACCGTAT
TCTGACACAC AATTGCAACG TCTTTATTAA TCGACAATTG ATCTACAACT ATCCCGAATC
TCTCTTTGCC GAACGCGGGG TCATGGCGAT TGAACACGCC GATTTTGAAG GCGTCGAACG
ATTGGCCGCT GTTCTCGGCG GTGACGTGGT TAGCACGTTC GACAATCCCG ACAAGGTCAC
GTTAGGAGAG TGCGCGTTGA TTGAAGAAGT ACGTACTCGG CAACGACAAT TTCGTGTCGG
TGGTACGGTT GCGTGGGCAA TTCCATTCTC ACTATATGCT CACAACCTTG CTTGGTGTTC
GTTCGTTGGT TCGTTGTAAT TGTTCTAGAT CTTTGTGGGT GAAGACAAGG TTTTGCGTTT
CAGCGGTTGC AAATCCGGTG AAGCCTGTTC TATTGTCTTG CGCGGTGCGT CTACCCACGT
CCTTGACGAA GCCGAACGTT CCTTACACGA TGCCTTGGCT ATCCTAACAT CCACCGTCAA
GGAACCCCGA ACGGTGTACG GTGGGGGGTG TACCGAAGTG GCCATGGCTG CCGCAATCGA
CAAGGCCGCG GAAGAAACGC CCGGCAAAAA AGCGCTCGCC ATGGCCGCCT TTGCCCGAGC
CTTGCGTCAA TTGCCGGCCA TTGTCGCCGA CAATGGCGGC TACGATTCGG CCGAACTCGT
CACGCAGCTG CGGGCGGCCC ACGCCGCCGG CAAGGCCTCC CACGGACTCG ATATGTACCA
AGGAACCATT GGTGATATGG AAGCACTCGG TGTACGCGAA TCGTTCCAGT CGAAATTGCA
AGTCTTGCTG AGTGCGTCCG AAGCGGCCGA AATGATTCTC CGGGTCGACG ATATCATCAA
GGCGGCCCCG CGGCGGAGAG ACGAGTACGG GTATTAG
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| Protein sequence | MEQAYISEGT SIDKGENARL SSFVGAIAIA DLVKTTLGPK GLDKILQKVD PHDQSISVTN
DGATILRSVH VDNAAAKVLV DIARVQDDEV GDGTTSVAVL CGELLREAEQ LVTQRIHPQT
ICAGWRLARQ VARQALLDAS QQATDEDVFR EQLLQIATTT LSSKLLTHEK AYFANLAVDA
VLRLKGSRNL EHIQVLKKAG GVLRDSYLEE GFLLNKTVGT GQPKRVEHAK ILVANTSMDT
DKIKIYGSRV KVDSIDKIAS IEQAEKAKMK DKVDRILTHN CNVFINRQLI YNYPESLFAE
RGVMAIEHAD FEGVERLAAV LGGDVVSTFD NPDKVTLGEC ALIEEIFVGE DKVLRFSGCK
SGEACSIVLR GASTHVLDEA ERSLHDALAI LTSTVKEPRT VYGGGCTEVA MAAAIDKAAE
ETPGKKALAM AAFARALRQL PAIVADNGGY DSAELVTQLR AAHAAGKASH GLDMYQGTIG
DMEALGVRES FQSKLQVLLS ASEAAEMILR VDDIIKAAPR RRDEYGY
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