Gene PHATRDRAFT_39515 details

Gene Information

• Locus tag: PHATRDRAFT_39515
• ID: 7195347
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011688
• Strand: +
• Start bp: 31570
• End bp: 33853
• Gene Length: 2284 bp
• Protein Length: 623 aa
• GC content: 47%
• Product: predicted protein
• Protein accession: XP_002183534
• Protein GI: 219126586

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAAGCG TTACAGATAC TATTAGACAT TGGATGGTTA GAAGGCCTGT TACTACCGCT 
TCCTTTATGT TAGTTGACCT GTGCTATATC TTTGTACATA GTCACTGCTT CGTCCCCTGC 
CGTTGGCTCC CAAAAAGCGG CCATCATTTC TGTACTTTCC GCGCGACGAA AACACGATAC 
GATTTGACGA GACTTACGGG AATCTCTCGA CGTCAAAAAA AGCCACGTGC GAATCTTCAA 
CGCCGAAGGT AGTCACTATC GACTGACTGT GAGTCGGTGG CAGGAGAATA CGATGATCAA 
TCTACTATAG AGCACGGTTC AGGAAACGTG GGTTCGAATA CCACACGATG TCTTCTGTAT 
GAGTTGCCCT AGTTTAGCAA GACTCTTTTG AACCCAACCA GTATGCCGAA CGAGATCAAA 
ATGGGCAATA CAACCAAATC TTCCTACCAG TCCATCGTGA TTAGCGATGA ATTAAAGACG 
ACAGAGATCC ATGCTATAAA ACGAAATCAA GAACAGATAC GCAACGGAGT TTTCGACGTG 
AGCGTAATTG AAAGCGGATA CAGCAGTCAG AATCCGTACA GTTCACCGAG TAACGAGCAA 
GACGATCTAC TTACACAGTG CTTCAGGTTG TTGGGGTTCG ATTGCAACCC ACTCGTCGTA 
AATGAAGGCG GAAGAAATTC GGCGTCGGCA GATCTTCGCT TGGCTATGCT GTCAAACTTC 
TCTACAGCCT ATAACACTGT AAGCATCAGT CTCGCCTTGG CAATCTTACG GAACGTTCGT 
CCAGTAACTA AAACGAGCAA CCAAGCGTTT TGCTCTTCGG CACTTATTGG AGGTATGATT 
GTTGGGCAAT TACTTGGCGG CACTATAGGA GATGTAGTGG GACGGCATAG AGCAATGAGT 
CTTGTCATGC TCCTTCAAAT TGTAGCAGCG ATAGGTTCAG CACTCTCGTG TTCGTTGTTG 
ATGTGTGGTC GTGAAATTGA TCTGTATCAT ACGTTGACGG GTACGTATCG AGTAAAGTTA 
CTCCGTTACA TAAGTTTACC AATGTAAGGA CCCCACACTA ACCTCCCTTT ACTCGCAAAA 
CGTCAGCCTG GCGTTTCTTG CTTGGAATAG GCTGTGGTGG AGTTTATCCT TTGGCGGCTA 
CCATGACGGC AGAATCCACC CATTGCTCGC AGAAACGCGC CAAGCTAGTA GCACTAACTT 
TTTCCATGCA GGGTTTTGGG TACTTGGCTG TGCCTTTAAT AGCGTGGCTA CTGGTCGCCG 
TTCTCGGGGA AGGTTCGAAC ATTTCTTGGC GGGTCCTACT CGCTCTTGGC TGTGCCCCAG 
GTATTGTGCT ATCGATTGCG CGAACGCAGC GAACACATTC TCTACAAAAG AGACCAATAA 
GAACGAACGA TTTCTCATCG ACGGCACGTC CACGAACCGC TCCTGTTTCG ATACAAGATG 
CAGTTATGAA GGAACCCGAT CTGTTCAGGA AACTTCTTGG AACCAGCGGA TGCTGGTTTC 
TTTTTGATGT GATGTTTTAC GGCAACACGA TTTTTCAGCC TGTTGTCTTG TCTGCCGCCT 
TCGGACCCGC TGAAACTGTA TCAAAAGTAG CGCAAGATAC ACTGTTGATC AATGCCATGG 
CATTTCCAGG TTATCTCGCA AGCATTGTTT TGATCGGGCG CCAAAGTCCA AAATTTGTTC 
AAGCTCAAGG ATTTTTGCTA ATGGGTTTCA TTTACACAGC AATCGGCTCC TTCTTTGGTG 
AACTAGCCGG GAATCATTGT CTACTCCTAG GGGGATATGG GGCATCCTTT TTCTTTTCCA 
ATTACGGACC CAACTCAACG GTACGTGTCT TGCGTCGTTT GAGGAGACAG AAGATCTTTG 
ATAAATTTCT CACCGTATCG CCTCCTCTTG AGAGATACAG ACCTACATGC TTCCATCCGT 
CACGTTCTCC CAAGCATGTA GATCAACTCT CAACGGTTTT TGCGCTGCTT GTGGTAAGGT 
TGGTGCACTG TTAGGGGCAC TCTGCTTCAT CCCGATTTTA CATGTCTTTG GTGAGGCCTG 
GGTCATGTTT GCTTGTGCCG CAATTGCTTT CACTGGCTTT GTTTTGACGC TTCTTTTCGT 
AAACGAAGAG ACAGATTCGT CCGAATCCCT GAAAGACACA GCAGATCATC TTTGTTGCTC 
CACTTTTGAA GACCAGCAAG GAATGGGGAA CGAATCAATA GATTTGATTG TGACCCACGA 
TCGCAATTTA CCTCTGAAAG TCGTGTTCAG CCGGCCCTCG CTCTTTGACT ACTACGATGA 
TTGA 

 

Protein sequence

MSLLRPLPLA PKKRPSFLYF PRDENTIRFD ETYGNLSTSK KATCESSTPK FSKTLLNPTS 
MPNEIKMGNT TKSSYQSIVI SDELKTTEIH AIKRNQEQIR NGVFDVSVIE SGYSSQNPYS 
SPSNEQDDLL TQCFRLLGFD CNPLVVNEGG RNSASADLRL AMLSNFSTAY NTVSISLALA 
ILRNVRPVTK TSNQAFCSSA LIGGMIVGQL LGGTIGDVVG RHRAMSLVML LQIVAAIGSA 
LSCSLLMCGR EIDLYHTLTG CGGVYPLAAT MTAESTHCSQ KRAKLVALTF SMQGFGYLAV 
PLIAWLLVAV LGEGSNISWR VLLALGCAPG IVLSIARTQR THSLQKRPIR TNDFSSTARP 
RTAPVSIQDA VMKEPDLFRK LLGTSGCWFL FDVMFYGNTI FQPVVLSAAF GPAETVSKVA 
QDTLLINAMA FPGYLASIVL IGRQSPKFVQ AQGFLLMGFI YTAIGSFFGE LAGNHCLLLG 
GYGASFFFSN YGPNSTTYML PSVTFSQACR STLNGFCAAC GKVGALLGAL CFIPILHVFG 
EAWVMFACAA IAFTGFVLTL LFVNEETDSS ESLKDTADHL CCSTFEDQQG MGNESIDLIV 
THDRNLPLKV VFSRPSLFDY YDD