| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_52461 |
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| Symbol | |
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| ID | 7195117 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | - |
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| Start bp | 318781 |
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| End bp | 321769 |
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| Gene Length | 2989 bp |
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| Protein Length | 979 aa |
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| Translation table | |
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| GC content | 61% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183465 |
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| Protein GI | 219126439 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000189103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGACCT CGGCTCATTT CAAACTGAGC GACTTTCCTC ACAAAGTCCT CGACCCGATC
GCCACCCTCA CCGTCCCACC CACCTACGCG ACCATCAAGC GTGCCCAACG CCAGCTCATG
ACTAACGCCG CCGCCATTCC CACACTCAAC GGAGGTGGCG CCCACGGCCA TATGGCCTTG
ACCCTGACCG CCCTTGCCTA CGCCGACATC AGCGACGTCC CGTTCGTCAT TCCCGTCGCC
CCTCCGGCCA ATCCGCCTCC CGGCGCCACG CAACCGCAAA TCACCGAAAA CAACCGCATT
CATCAACGCG ATGCTGACAT CTACAACCTT TATGTCGCCG TCAACAACGC GCTTCGGCAG
CAACTTCTCG ACGCGGTTCC CCGCATTTAT GTCCGCGCCC TCGCCCATCC CATGTTCGAG
TTTAGCAACG TCACGTGCCT CGACTTGCTC TCGCACCTCT GGACCAAATA CGGCACCATC
AAGCCCGCCG AGCTCCAGAA AAATTTCCAG TCCATGTACA CCCCTTGGAA CACAACCGAG
CCGCTCGAAT CCGTTTTTCT TCAGCTCGAC GAGGCCATCG CTTTCTCCAT TGACGGTAAC
GACCCCATCT CGGAAGCTGC GGCTGTTCGC GCAGGCTACG AAGTCATTGC GCACTCGGGC
CTGCTCCCCC TGGACTGCAA AGAATGGCGC AAATTGCCTA CTGCTGCTCA CACACTTGCC
CATTTCCAGC AGCACTTTTC CCTTGCCGAC GACGACCGGC GCCTCACGGC CACCACCGGT
TCCCTTGGAT ACGCCAATGT GCTTGCTGCT GCCCCCTCTC TTGCTCCTGC CACAACCTCC
GACACTCTCA GCCTTCCTTT CTCCGCGCTC TCTGTGTCCC AAACTTCTGT CTCTTCGCCG
GACATGACCT ATTGCTGGAC CCATGGTACC AGCAAAAACC GGCGCCATAC GAGCGCCACG
TGCAAGAACA AGGCCCCTGG CCATCGCGAC GACGCGACCG CCACCAACAC TCTCGGCGGC
TCCACCAAGG TTTGGACCGC TCCCAAGCCC CCTGAATAGG AAAGAGGGAC GGCTACGCCG
ATGGTTAACT CTAGTAATAC CGATTCTTTA AATCATATTA CTCGTCTTAA TTCATCTGTA
GTCCCCTCCC CGCCTAGTCC CCATACCTCG GCCATTGCTG ACACCGGTTG CACCGGCCAT
TACATCACCG TCAACTGCCC CCACACCCAC AAACGTCCTG CAAGCCCCAG CCTTGCCGTC
CGTGTCCCTA ACGGCGCCGT CCTCCGCTCA AGCCACATTG CCACCCTAGC CCTCCCTGGC
TTCTCCCCTT CTGCTTGCCA GGCCCACATC TTCCCCGGGC TTACCTCGCA CCCACTCATT
TCGATTGGAC AACTTTGTGA CGACGGCTGC ACTGCCACTT TCTCAGCCAC TCGCCTCGAG
ATCCACCGCG ACACTACACT ACTCCTCTCC GGCACTCGTG CACCCACTAC CGGCCTCTGG
CACCTTGATC TTACCCCTGC CAAGCCTCCT GCCACAGCCC ACGCTCTAGT TCCCAACACT
CCCCTCGCTG ACCGCATCGC TTTTGTTCAT GCCTCGCTCT TCTCCCCGGC TATCTCCACA
TGGTGCCAGG CCCTCGACTC CGGCCATCTT GCAACCTTTC CTGCACTTTC CTCCCGCCAG
GTCCGCAAGT ATCCACCTCA TTCCCCCGCC ATGGTCAAAG GCCACCTCGA CCAACAACGC
GCAAACCTTC GCTCCACCAA GCTTCCCCCT GTAGGTTCCC CCATCACGAC GGAACCCCCT
GCCGCCGCTG TGCCCGACCT TGACCCTCCC GACGCCCACC CCGTCACACG CACACACCAT
GTCTTTGTTG CCCACCAACG GGTTACCGGT CAGATCTACA CGGACCAACC GGGCCGCTTC
CTCACTCCCT CCAGTGCCGG CCACAACGAT ATGCTTGTTC TTTATGATTA CGATAGCAAT
GCTATCCACG TCGAACTCAT GAAGAACAAG TCCGGCCCCG AGATTCTAGC AGCCTATAAG
CGCGCTCATG CTCTTCTCAC CCAGCGCGGC CTTCGTCCCC AACTTCAGCG TCTTGACAAC
GAAGCCTCTG CAGCCCTCCA GTCCTTCATG TCCTCCGAGC ACGTGGACTT TCAGCTAGCA
CCCCCTCATC TACACCGTCG TAATGCCGCC GAACGGGCCA TACGCACCTT CAAGAACCAC
TTCATTGCTG GCCTCTGTAC CACAAACCCG GATTTTCCCC TTCATCTTTG GGACCGACTC
CTCCCACAGG CCCTCATTAC CCTCAATCTT CTTCGTCGCT CCCGCATCAA TCCCAAGTTG
TCCGCCCACG CACAACTTCA CGGTGCCTTT GACTACAACC GCACCCCGCT TGCTCCTCCA
GGCACCCGCG TCTTAGTCCA TGTCAAGCCC GCTGTTCGCG AAACCTGGGC CCCCCATGCT
GTCGAAGGTT GGTATCTCGG CCCCGCTCTC AACCATTATC GCTGCCATCG CGTATGGATC
ACGGAAACAC GTGCCGAACG TGTTGCCGAC ACCCTTTCCT GGTTCCCGAC CCGCATTCCC
ATGCCCGCCG CTTCGTCCAC CGACCGCGCC CTGGCCGCCG CCCGTGACCT GGTCCATGCC
CTCCAGAATC CTTCCCCGGC GTCTCCGTTC GCCCCCCTCG ATGCCACCCA GCACCAGGCA
CTCACAGATC TTGCCACCCT CTTTGCCACT GTGGCCGCCC CAGCCGACGA CGTCCCTGCA
CCCGCTCCCG TGCCTCCGGT CCGTCCCCCT GCCCCAACAA CTCCCCTTGC TCAGGTCCGC
TTTGCCGTTC CTCTTGTCAC GGCCAAACAT GCCCCGGCAC TTCCGAGGGT GCCCATTCCG
GCCCCAGCCC TTCCGAGGGT GCCCACCCTG GCCACCTATC ACTCTCGCAC CGGCAACCCC
GGCCGTCGCC GCCGCAAAGC ACGCACACAA CCGGCAACCC CAACCCTAG
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| Protein sequence | MSTSAHFKLS DFPHKVLDPI ATLTVPPTYA TIKRAQRQLM TNAAAIPTLN GGGAHGHMAL
TLTALAYADI SDVPFVIPVA PPANPPPGAT QPQITENNRI HQRDADIYNL YVAVNNALRQ
QLLDAVPRIY VRALAHPMFE FSNVTCLDLL SHLWTKYGTI KPAELQKNFQ SMYTPWNTTE
PLESVFLQLD EAIAFSIDGN DPISEAAAVR AGYEVIAHSG LLPLDCKEWR KLPTAAHTLA
HFQQHFSLAD DDRRLTATTG SLGYANVLAA APSLAPATTS DTLSLPFSAL SVSQTSVSSP
DMTYCWTHGT SKNRRHTSAT CKNKAPGHRD DATATNTLGG STKERGTATP MVNSSNTDSL
NHITRLNSSV VPSPPSPHTS AIADTGCTGH YITVNCPHTH KRPASPSLAV RVPNGAVLRS
SHIATLALPG FSPSACQAHI FPGLTSHPLI SIGQLCDDGC TATFSATRLE IHRDTTLLLS
GTRAPTTGLW HLDLTPAKPP ATAHALVPNT PLADRIAFVH ASLFSPAIST WCQALDSGHL
ATFPALSSRQ VRKYPPHSPA MVKGHLDQQR ANLRSTKLPP VGSPITTEPP AAAVPDLDPP
DAHPVTRTHH VFVAHQRVTG QIYTDQPGRF LTPSSAGHND MLVLYDYDSN AIHVELMKNK
SGPEILAAYK RAHALLTQRG LRPQLQRLDN EASAALQSFM SSEHVDFQLA PPHLHRRNAA
ERAIRTFKNH FIAGLCTTNP DFPLHLWDRL LPQALITLNL LRRSRINPKL SAHAQLHGAF
DYNRTPLAPP GTRVLVHVKP AVRETWAPHA VEGWYLGPAL NHYRCHRVWI TETRAERVAD
TLSWFPTRIP MPAASSTDRA LAAARDLVHA LQNPSPASPF APLDATQHQA LTDLATLFAT
VAAPADDVPA PAPVPPVRPP APTTPLAQVR FAVPLVTAKH APALPRPFRG CPPWPPITLA
PATPAVAAAK HAHNRQPQP
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