| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48755 |
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| Symbol | |
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| ID | 7195034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | - |
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| Start bp | 162137 |
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| End bp | 163917 |
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| Gene Length | 1781 bp |
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| Protein Length | 586 aa |
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| Translation table | |
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| GC content | 60% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183432 |
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| Protein GI | 219126370 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00414186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAATA GCGATTCGAG CAGTCGGTCT CCGGCGTCAC TCGCTGACCG GGATATCGAA
GATCTCGGTC GGCGCTTTCC CTTTGGCGAT ACCGAACTCC AAGCCCTCTA CGCCGCGTAC
GGAGCAATGG CGTATCCCGG GTCGGCAGTT CACCGGGTGT CCTTTTGGTC GGACTGGGCA
CGAGCGATTC GCCGTCCGGG TCGTGACGCA GCGGAGGCGA CCGTGGCAAC GGACACGGCG
TTGTTGCTCC GGGTGTGCGA AACCAAAATC CTCACGCCCG ATCTGGGCAC CCGGCTCTAC
CGAGCCGCCT TTTGGGTACC GGGCGACGTG CTCTGGTACG GTGGTACCGG ACAATCCCAA
AATCCGAAAT CTCTTGGGGA ACAAGTGAAC GCCGTGCCGC TGGCCAAGGA CGGTTCCCCC
GAACCAACTA CATCGGACGA GTATACCCGT AAAGCTCGTC TCGAGCGAAC CTTTGAAGGG
TTGACCTTGT CGTCCCGCAA AGGCTCCGGA CCCGCCGTCA AGGTTCTCTT TGACGCGCTC
GCCCTTGATC CCCACGCACC CGCCACTCTC ACTACCGTAC CGACACGTAT ACGGGCTTTC
GATTTCGTCA CGGCGGGCTA CCGCTTGGCC ATGGCCACGG CGTTTTTGGC TGCGGCCGCG
CACGACAATG ACGACGCCGA CGACATGGCC GGTTTCCTCC CCGAGGCCGA TTCTTCCGGA
CGCGATGCGG TTGCCTTGCG AGCGTTGGCG CAGTCTCTGA CGGAGCGAGC CCGTATGCGA
GAAGCTCGGC CGGGAATGTC GATCGAGTCC CCGCACGAGG ACCATACCGA TGATCACGTG
GAATTGGAAG ATGTTTACGA CTGGATCGAC GCCGTCGCTC CCTTATTCGC CTCCATTTTG
CCGACGTTTT GGCACCAAAT TCTGTTTCCT CATCAAGCCT ATCCCCCTTC GCGGACCGCA
TTTTCCTTCC CCCGCGTTCC CTGCGATTCC GTCTTTTTCG AATCCACCTC CAGTCCAACG
CTCTTTACGT TGGGCTGTCT ATCCAAGTCC CTCACTGGTG TTTACTACCG ACTCTACACT
TCCGCCAGCG ACGGCCTCTC CTTCAATCGT TTACAAAACG CGCTCTTGGG ATATTCCGGA
CCGACGCTGT TGTTGATCCG GACCACGGGT GGCGCCATCC TCGGTGCCTT CACCGCTTCG
GCCTGGAAGG AATCCCGCGA CTTTTACGGC AACACGGACT GTTTTTTGTT TTCCGCGGCC
CCCGTGACGG CCGTCTACCG CCCCACGGGC ACGGGTCGTA ACTTTATGTA CTGCAACTCC
TTCGCTCGCT CACGTGGGTA CGACCAACAA GCACACGGGA TCGGTTTTGG CGGTACCGTC
GACGAACCGC GATTATTTCT GTCGGAATCC TTCGATGCGT GTCGTGCCGG AGCACAGGAC
TGCACGTTTG CCAACGGATC GCTCCTACCC CGGACCAGTT CCGGAGCGCC GCAGACAAAT
TTCGAACTAG ACGCGGTGGA AGTCTGGGGC GTCGGAGGGG ACGACGTGGT CGACGCGGCG
TTGGGCCAAC GGCAAAAGGC GCGGGCTCTC CGGGAAGAAG GGATCCGGCG AGCGCGCAAG
GTGGACAAGG CGCAATTCTT GGACGACTTC CGATCCGGCT TGATGGATTC CAAAGCCTTT
CAACATCGAC AGCAAATGCG GGGTCGGGCC GATGTGGATT GCGAAGAACG AGCGACCAAA
CAGTACGAGT ACGAAAAGTA AATTAGAAGA TGTTGCTTCG G
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| Protein sequence | MGNSDSSSRS PASLADRDIE DLGRRFPFGD TELQALYAAY GAMAYPGSAV HRVSFWSDWA
RAIRRPGRDA AEATVATDTA LLLRVCETKI LTPDLGTRLY RAAFWVPGDV LWYGGTGQSQ
NPKSLGEQVN AVPLAKDGSP EPTTSDEYTR KARLERTFEG LTLSSRKGSG PAVKVLFDAL
ALDPHAPATL TTVPTRIRAF DFVTAGYRLA MATAFLAAAA HDNDDADDMA GFLPEADSSG
RDAVALRALA QSLTERARMR EARPGMSIES PHEDHTDDHV ELEDVYDWID AVAPLFASIL
PTFWHQILFP HQAYPPSRTA FSFPRVPCDS VFFESTSSPT LFTLGCLSKS LTGVYYRLYT
SASDGLSFNR LQNALLGYSG PTLLLIRTTG GAILGAFTAS AWKESRDFYG NTDCFLFSAA
PVTAVYRPTG TGRNFMYCNS FARSRGYDQQ AHGIGFGGTV DEPRLFLSES FDACRAGAQD
CTFANGSLLP RTSSGAPQTN FELDAVEVWG VGGDDVVDAA LGQRQKARAL REEGIRRARK
VDKAQFLDDF RSGLMDSKAF QHRQQMRGRA DVDCEERATK QYEYEK
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