Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39448 |
Symbol | |
ID | 7194954 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | - |
Start bp | 541384 |
End bp | 542184 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | |
GC content | 57% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183505 |
Protein GI | 219126523 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.078052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGGTC GAGGTGGCGG ACGGGGCGGT CGCGGTGGAC GTGGGGGACG CGGCGGGGCC CCTTTGACGG GTGCCAAACT GTTTCTGAAG CGCTCCGCTC AGGAAGCCGG CTTGGACGAT CGGAATCTTA ATCAATTGCA GGACATTACG CGTCCCCTTC TCTTTCCGAC CTACCGGTGG CATACCGAAA AGGCCACGTA CGAAGACTCC GAGATCGTCG ATCCACCGAC ACTCGTTCAT CCCAAACGAA CCGCATCGCA GGTTTATCTC ATGAACAAGC AACGCGAATG CCGGGAACGC TTCCACAAAT CCGCACACTA CGTACAACCA TTACCAACGG TCGACGTTGT CCGGTACGGA CAAAAGAACC GACACGTGGC GGTGGATGTG GCGGTCCTCG AGTCCATGGG ACAACAACAC CATCCCTACA AACTCGCAAC CGACAGTCGC TACATGCCAC CCGAACTCTT TCGCGACTCC CGTCACATGG CCGGCAAACA CCCACCAACA TACACCGATA CCAATACGCG GGTCGAGATA TCGGGGGATG ATTTGCCTGT GGATACCAAC GACGACACGG ATAACGTCGT CCAGGACGCG GCGGCGAGCG GTACTACACC CGCCAACGCA ACCGCAGCCA ACGCCGGAGT CAAGGAGGAC GACGAAGAGG ACGAGGATCT CGTACTAGAA GAACCAGAAG AGGAAGAAAT TGAAGATTAT ACCATGAACT ATTACGAAAG CGACAACGAA TCGGGTGGTG ATGGTGGTGG CGGAGAAGAT GGCGGTGAAG CGACATTCTA A
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Protein sequence | MSGRGGGRGG RGGRGGRGGA PLTGAKLFLK RSAQEAGLDD RNLNQLQDIT RPLLFPTYRW HTEKATYEDS EIVDPPTLVH PKRTASQVYL MNKQRECRER FHKSAHYVQP LPTVDVVRYG QKNRHVAVDV AVLESMGQQH HPYKLATDSR YMPPELFRDS RHMAGKHPPT YTDTNTRVEI SGDDLPVDTN DDTDNVVQDA AASGTTPANA TAANAGVKED DEEDEDLVLE EPEEEEIEDY TMNYYESDNE SGGDGGGGED GGEATF
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