| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39429 |
|---|
| Symbol | |
|---|
| ID | 7194946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011687 |
|---|
| Strand | - |
|---|
| Start bp | 500717 |
|---|
| End bp | 501772 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183495 |
|---|
| Protein GI | 219126502 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.266609 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATCCA ACGTTACATT GCTCTTGTTG GCAGGAGCCT CGTTCGTCGT GTCACTGACT
ACCTTTATGG AATCACGCAT GGTCCTACTC GCGTCGCACC GTACGGTAGA AGAAGTTGTG
GCTATCGAAT CGAATCTGGC TGATCTTTAC AGTAGTAGAC TCGTCAGCAC GGAACAGTCG
CTTGGTGCCC GTTTGAGCGA GACCAGTTGC ACACTATCAG ACATATCCTT TGTCCGAAAT
CTATCGCTTT CAGTTTCACA GCCAACTTGG CTGGCTTCCT TTCCCGGTTC GGGCTCCGAA
TTGCTCCGCG AACTCGTACA AGCCTCCACT GGATTCGCCA CGGACGAAGT TTACAACCGC
GACACGGACT GTCAGGACTC CTCCGTGATC ATGTGCAAAA CGCATTGGCC CTTGCGCATC
GGTGGTGATG CCCGGAAATG GGGTGCTCCA CCGGTGGCCC GGGCTCCTCG TTTTGCCAGT
GATGTATTCG TGTTGGTCCG CCATCCGGCC GAAGCTTTGC CATCCTTTTT CAATTACAAG
TGGGAAATGC AGCATCACGT TCAAGATCAT TCGCAACAAG GGACCGAAGA GGAATGGAAT
GCTTGGAGGG ATCGACGTTT CGATCAAGAT TTAGAAAATT GGAAGCGACT TTTAAGGGTG
TGGGCGACGC AAATGACACC CTACAACGTG GCGCACGTGA TTGCTTACGA AGATTTGGTG
GATGAAAGGA AAGGTCCTCG TTTGTTTCAA ACCATCACTG AACATCTCCA AGCCACCGTT
TCCCGACCCA TATATGGATT TGACGACCCA GAAAATGCCT TCAACGACAA CGCCGTTACA
CAATGGACGT GTCTATGGAA AAAGATAGTG CAAGAACGGG CAGCAAAGAA GCGACGCACT
CGAGGGTATC AGCCATCGTA CCATCTGCGG CAAAAGACAG CTTTGATCCG AATCCTGCAG
GAGGCTATGG ACGAGCTGTC CGACTACCCC CTCTTTCTAC CAATTTTGCA ACGCTACAAG
GACGATACGG AACGTATTCT TGTCTCGCAA AGTTAA
|
|---|
| Protein sequence | MGSNVTLLLL AGASFVVSLT TFMESRMVLL ASHRTVEEVV AIESNLADLY SSRLVSTEQS
LGARLSETSC TLSDISFVRN LSLSVSQPTW LASFPGSGSE LLRELVQAST GFATDEVYNR
DTDCQDSSVI MCKTHWPLRI GGDARKWGAP PVARAPRFAS DVFVLVRHPA EALPSFFNYK
WEMQHHVQDH SQQGTEEEWN AWRDRRFDQD LENWKRLLRV WATQMTPYNV AHVIAYEDLV
DERKGPRLFQ TITEHLQATV SRPIYGFDDP ENAFNDNAVT QWTCLWKKIV QERAAKKRRT
RGYQPSYHLR QKTALIRILQ EAMDELSDYP LFLPILQRYK DDTERILVSQ S
|
|---|
| |