| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39425 |
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| Symbol | |
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| ID | 7194943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011687 |
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| Strand | + |
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| Start bp | 493277 |
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| End bp | 495181 |
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| Gene Length | 1905 bp |
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| Protein Length | 634 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183365 |
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| Protein GI | 219126231 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.292382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAAGC GTCCTTTATG GGTTGTCCAG ATTCGACGAA GAACGATAAG GCTCGTCTCG
TTTGCCGTAT CGTGTGCACT TTTAGCAGTC GCCATCGGCT CAATGGCACT CATGTTCCGT
TGGGATGGGA ACGACCTTTC GCTTGGGGCA GAAGTAGATC CATTCAAGAT TCAAATCAAT
GCAAGAAAGA GTGAAAGCGT GACCTTCCTT CAGAAAGGTG TCCAAATGCC CGTCAAAGAC
TTTGCGGTAC ACGGAACAGT CATCAACAAA ATTACAGATG CTGGTATCGC TACCACCCAA
TTCGAGAAGT GTTCTGAGGG CAACACCAAG ACTTGGCTGG ACGGCTCCAG GATTGGAAAC
ATTAACGAGT CGTTGCTGAC ACTCGACTTT GTTCGCCAAA ATATTGTGGA TTCGCCAACT
GCTCTCGGGT CTTATGATGC TGTGTCCATA ATCCTAAATC AGACCATGAG TCATACATCT
TCGCGATTCC GCAACTATCA CGATGCCTCC ATCACTTCGG CCAATATTCG AACATGGGCT
GTCCGTCTCG TGTACTTATC CCTACATTAT CATCAACACC GGCATGCTTT ACGGGAAGCA
CGCATACGAG CCTTAGACGA CGCATGTTAT CCAGTTATGC TGGACAGAGG CGTCGGTCTG
TACGACTACG AGTGTCCCTC AGCAAAATAT CTAGTGGTGG GTCTTGCCAA ATACGGATTG
GGTGCCAACG TTCGCGCGGG CGCGGTCAAG GCACTCGTAG CCGGGCTAGC GACCGACCGA
GTCGTTCTCT TTGTCAACAA TGTAGCGGAT CTCGAGAGTG CTACCAAAGA CATGGGTCCT
TGGTCGTTGG CGTCGTGTCC ACGTAGAGAT CATCAATGCT TCTTTTTGCC CCTAAGTCCG
TGTGTGCTGC TGCGTGAGGA ACTGGCTGCC GCACACATTT TGGACAAGGG CGAAATGAGA
GCTTTGTTCA AAACTGGACG TGTTCCTCTT GGACGAATTG ACGATCGAGT GCTGGTGCTG
CATCTCCATT TTATGCCTCA GCTAAAGTTG CCGGGGAATA CCGTTGAGCT ACTTCAAAAC
TACTCATATT CCCTGATCGA GGGCGTTTTA TCAACCGATT CTAGACGGCC AGTCATGGAG
CAAGCAATTG CAAGTTTTAC TCTACCAGAC GAGCCTCGCC CCGCGGGATA TAATTACGCT
TTAGCGAACA GCCGCATTCA GCATGCGCTT ATGTTCTACA CGATGCGACC CAATCTGCAT
AGTCGCAAAC GAATAGACGA GATTTTAAAG GAAATCATTC CCGCAAAGAC TCTCCCCGAG
AGATCGGTTG GCATTCCGAT TCGAGCTTCG GATAAGTGCC GGCAGGAAAG CCAATGCTTA
TCCTTTTCCC AGCACATAGA AGTTTCCAGT CTGCTTTGGA ACGACGTTTA CCCCAACACA
TCCCACTCGG ATCAACCCAC ACTTATTTTT ACAACGGAAT CGAAAGACAT GATGCATGAA
GAACACGCAT ACATTTCCAA CACCACAATC CCCAAACCCT TTGCGAATAT GAACTTGCTC
ATGAATCCTC ACGATGTGCT ACCCAATACC GGGTTTGTTG AGGAAATCGT CGCGAAAACC
ACCAGCTTTT CGGCTGACGA TGCAATGCTT TCTGCCGTCA CGTCATTACA ACTCCAACTT
TTGGCCAGAT ACACCATTGC CAACTGCTGC TCTAACTTTC ATACACTTCT GGGGGACTTT
CTAGTGGAAG GTATGGGAGC CGCACATCAC AACGATTTTT CCTGCTTGCA GGAGCACTCC
GATCCAGTTT ACGCCATTTG CTGTGGCTGG CACAAGGATT GCAAACAAAA GCGAGCGGCT
ATCCTTCTCG CCCGAAACTC TACAGATGAA ACGATGAAGG ATTGA
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| Protein sequence | MKKRPLWVVQ IRRRTIRLVS FAVSCALLAV AIGSMALMFR WDGNDLSLGA EVDPFKIQIN
ARKSESVTFL QKGVQMPVKD FAVHGTVINK ITDAGIATTQ FEKCSEGNTK TWLDGSRIGN
INESLLTLDF VRQNIVDSPT ALGSYDAVSI ILNQTMSHTS SRFRNYHDAS ITSANIRTWA
VRLVYLSLHY HQHRHALREA RIRALDDACY PVMLDRGVGL YDYECPSAKY LVVGLAKYGL
GANVRAGAVK ALVAGLATDR VVLFVNNVAD LESATKDMGP WSLASCPRRD HQCFFLPLSP
CVLLREELAA AHILDKGEMR ALFKTGRVPL GRIDDRVLVL HLHFMPQLKL PGNTVELLQN
YSYSLIEGVL STDSRRPVME QAIASFTLPD EPRPAGYNYA LANSRIQHAL MFYTMRPNLH
SRKRIDEILK EIIPAKTLPE RSVGIPIRAS DKCRQESQCL SFSQHIEVSS LLWNDVYPNT
SHSDQPTLIF TTESKDMMHE EHAYISNTTI PKPFANMNLL MNPHDVLPNT GFVEEIVAKT
TSFSADDAML SAVTSLQLQL LARYTIANCC SNFHTLLGDF LVEGMGAAHH NDFSCLQEHS
DPVYAICCGW HKDCKQKRAA ILLARNSTDE TMKD
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