Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_39288 |
Symbol | |
ID | 7195003 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | + |
Start bp | 125307 |
End bp | 126425 |
Gene Length | 1119 bp |
Protein Length | 331 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183297 |
Protein GI | 219126089 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.21088 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATCGC CTGCTAACAA AGCTGCCTAT AGCTGGCTGC TTCTACCTGC TGGCAACAAC GAAAAGGCGG CTACGGGAGG ATTCAATGCT TCCATGGTCT TAGACGGCAC GAGAAACCAA GGCTCAACGC ATGTTCAAAT CCATCGAAAT ATTACGTTCG AAGGTGGCTA CAGGCTGCAA CGCAACGATA ACGATCTGGA AGTAATGGCA AATCGAAGCA TCATGTTCGT GCACGTCGGA AAATCGGGCG GAGAGACTAT CAAGCGTGTT CTAGAGATCG CATGTCGGAC TAAAGCAAAC AAAGGTCAAC GGAAGAGATG CTATAGGAAT TTGACGCAAA GTCGTCTGTC TTCTTCAGTC AAAAGCTATT TTCACTGCTT CAAAATTCGG CCGGCATCTG TGAAAGAAAC TGCTATACAT GATGCAGATG CATTCTTGTT CAGCTTGCGT CACCCTTTGG ATCGTACACT CTCATGGTTT CGAAACTTTG ATCCTCAAAA CTGCCCTGAA GGGAAACGAA CAAAGGCGAG CTGCTTGACG GCACATTCCA TTAAAAATGA TCCTACCAGT TGGGCCGGTC ACTTTTTTGG AGTTTGCTTC TCCAGCGCAG AAGCATGGGC ACAAGCTTTG AGTCATCCGA AAGACAAATG CAACGTTCTC GCATGGGACA CCATCCTGGG ACGAATTGCA ATCCAAGATG AGTCTTTAGT GGCACACATG ACGGCAAACA TTCGACGATA TGCGAAAGCT ACAGCAGCAA GGTATCCAGA GAAAGATGTG CTTGTTGTGC GAATGGAATA TATGTGGAAG GATCTTAAAG CTTTGGATCT TAGTTTAGGA GGAACTGGTC GATTTGGAGC TATGGCTGGT TCCAAAGTCG CCCACGGAAG CGAGGTGTAC GAATTCCAAA ATGAGGATCT TTCGGCGGCA TCCGTCGTCA CAATGTGTTG TGCTCTACGA GATGAAATGG AAGTTTTTTA TTCTCTTCTT CATAAAGCGC AAAATCTCGA TGCCGTTCAT AAACGTCGAA CATGGGAAGA TGCTTTAAGC TATTGCGGAT CTACCTCATG GATAGATTTT GAAGCACAAT GTCGTACCAT TCAGCAATCA TTCCATTGA
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Protein sequence | MESPANKAAY SWLLLPAGNN EKAATGGFNA SMVLDGTRNQ GSTHVQIHRN ITFEGGYRLQ RNDNDLEVMA NRSIMFVHVG KSGGETIKRV LEIACRTKAN KDAFLFSLRH PLDRTLSWFR NFDPQNCPEG KRTKASCLTA HSIKNDPTSW AGHFFGVCFS SAEAWAQALS HPKDKCNVLA WDTILGRIAI QDESLVAHMT ANIRRYAKAT AARYPEKDVL VVRMEYMWKD LKALDLSLGG TGRFGAMAGS KVAHGSEVYE FQNEDLSAAS VVTMCCALRD EMEVFYSLLH KAQNLDAVHK RRTWEDALSY CGSTSWIDFE AQCRTIQQSF H
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