Gene PHATRDRAFT_39281 details

Gene Information

• Locus tag: PHATRDRAFT_39281
• ID: 7195024
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: +
• Start bp: 112755
• End bp: 114852
• Gene Length: 2098 bp
• Protein Length: 671 aa
• GC content: 48%
• Product: predicted protein
• Protein accession: XP_002183293
• Protein GI: 219126080

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0784232
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGTCCAT GGCATCGTAC TCACAGTCAA GCATCGATCG CTCTTCGGGG TAACGTGGGT 
AGTAGCAGCT GTAAGCAAGG AGTAGCTCAA GGGCTCAGGT GCATCGCCTG TTACTTGGTC 
AAACGCATTC TCGGAAATAG GGGTCCTCTC AGGCGAATTT TGTTTGGCAT CGGAGTTATC 
ATACTCCTAA CGACTGCGAG GCAGGGAAGG TCCTTCGCCA TAATTCTTAA AACGAACACC 
AAAGAGAGTT GGATAAAGCT TAAGCTGGCT CCTGCTTTTA ATCCTGCTGT GAAAGCCGTG 
GGTGGTAAAG GACCAGTGCG CGCATCAGAG CGTAATCGCG CAAATTTTTC TTCATGTAAC 
ACAGATCCTG GCCAAGCCGA GAATGCTGAG GGAAGTGCAA TGGGCTACAA TAATCTTCTC 
AGAATCCGCG AGATCAAGAT GAATGAAAGT TCAGCGAAAG GGCAACGACT TCTATGCGTA 
TTTCCTTCAT TTCCTTCGGT TCAGCTTCAG AACGCTGCGG TAGAAACGTA TGGAAAGAAT 
TGCGATGGTC GTCTCGTAGT AAGCCGCAAT ACGCCGCTGG TAAGCTACAG TTCCCAGACG 
TATTGGATAA ACGAGAGAGA CCCTACATAT AGAGATGGAG CGGGGGCAAT ACTTCAGCAA 
ATTCTGCACA AAGTCGGAAA TGAGTATGAT TGGTTTTATT TTGCTCAACC AGGGCGCTAT 
TTGATCGGAT CCAATGCCCA GATTCGCCTA TCCTTTACGC GCAACGGAAC CGATTTAGCA 
AGGAAGAATC CGTTAGCGCT GCGAACATAC ATACACAATA TTTGGGAGTT TCCCAAAAAG 
GTTCATGCAC GAGGGAGTTG CCCTGGAACT GAGTTTTTAA ACCGCGCTGC CGTCGATGAA 
CTCGTTCACG TCTATCTCAA GAACAAAGAG TCTACATCAG GAGATTCCAA TTTGATTACA 
TGGATACAAT CAGTGATCTC AGACACGGGC ACACGATGTG TGAAAGGCCT GCTAGCAAAA 
ATGCCAAATC CACAGAAGTA TGCCGAGCTG CTACTGTCGC CCAATGCGAC ATTCGAGCAA 
CAGGCCGTGG GACTGTATCG AATTCAATCA ATACTGAACG GTACATGCGA CCGCCAATGG 
CGAGAAAAAT TCGGATTTCT GAATGGAGAT GTTCGGGATG TAACTTTACT GCGCAAGCAT 
GGCCCAGCGT TTGATTTCTT TCCTGCAGGT TTTCACAAAT CCGTTTGTGA GACCCCCTTC 
GGAACAGGAA CCGAAGGACA CATGGGATAC AGGGGTTTGC GAAAGATCCA GATTGCGCAG 
CAGTCTCAAG AGAAACGAAT CTTGTGTATG ATTTACACCC ACGAGAGTCG CCATGAGCAG 
TTGCGCTCAA TAGTAGAGAC ATGGGGCAAA GGATGCGACG GGTTCTTTGC AGCTTCAACA 
AAAAACGACG AAAGTTTAGG AGCAATCAAC TTACTGCACG AAGGTCCGGA GCTATATGAT 
AATTTGTGGA TGAAAGTCAG GGCTATGTGG CAGTATGCTT TTGACCATTT CTTGAACGAC 
TACGATTTTT TCCATATTGG TGGGGATGAC CACTACGTCA TCGTCGAGAA CCTAAAATAC 
GCTGTTGCTA CGGGAAATTG GAAAGAACAC TGGAACCAGA GTGTTCCTCT CTTCTTAGGT 
GGATCAGTTG CGGACCACGC AGACCTCCAA AGACGATACT GCGGAGGTGG CAGTGGCTAC 
ACTTTGAATC GTATAGCTCT ACGAAGGCTG GTAGAAGAGC TTTTTCCCAA GTCACAGTGC 
TGGCCGCATT GGACATCAGC TCAGGAGGAC AGAATCATGG CAGGTTGCTT CCGGTCAGTT 
GGAATTCAGT GTATGGATAC AAACGATTAT AAAAATGAGA CCCGCTATCA TCCTTGGGGC 
GTGGACTATC ACGCTTCTTG GACAAAGAGA AAAAAAGGAA ACTGGCACCC AAAAGTTTTG 
GAAACAGTTC ATGGGATTGC GCAGCCCGAA GGCTTGGCAC AAATATCAGA TTCTAGCGTA 
TCCTTTCATC TGAAACCACT CCGCACAGAT CCTGATTTGC CGCCCGATCG AGGAATGA 

 

Protein sequence

MCPWHRTHSQ ASIALRGNVG SSSCKQGVAQ GLRCIACYLV KRILGNRGPL RRILFGIGVI 
ILLTTARQGR SFAIILKTNT KESWIKLKLA PAFNPAVKAV GGKGPVRASE RNRANFSSCN 
TDPGQAENAE GSAMGYNNLL RIREIKMNES SAKGQRLLCV FPSFPSVQLQ NAAVETYGKN 
CDGRLVVSRN TPLVSYSSQT YWINERDPTY RDGAGAILQQ ILHKVGNEYD WFYFAQPGRY 
LIGSNAQIRL SFTRNGTDLA RKNPLALRTY IHNIWEFPKK VHARGSCPGT EFLNRAAVDE 
LVHVYLKNKE STSGDSNLIT WIQSVISDTG TRCVKGLLAK MPNPQKYAEL LLSPNATFEQ 
QAVGLYRIQS ILNGTCDRQW REKFGFLNGD VRDVTLLRKH GPAFDFFPAG FHKSVCETPF 
GTGTEGHMGY RGLRKIQIAQ QSQEKRILCM IYTHESRHEQ LRSIVETWGK GCDGFFAAST 
KNDESLGAIN LLHEGPELYD NLWMKVRAMW QYAFDHFLND YDFFHIGGDD HYVIVENLKY 
AVATGNWKEH WNQSVPLFLG GSVADHADLQ RRYCGGGSGY TLNRIALRRL VEELFPKSQC 
WPHWTSAQED RIMAGCFRSV GIQCMDTNDY KNETRYHPWG VDYHASWTKR KKGNWHPKVL 
ETILICRPIE E