Gene PHATRDRAFT_39274 details

Gene Information

• Locus tag: PHATRDRAFT_39274
• ID: 7195021
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: -
• Start bp: 94823
• End bp: 96934
• Gene Length: 2112 bp
• Protein Length: 703 aa
• GC content: 55%
• Product: predicted protein
• Protein accession: XP_002183419
• Protein GI: 219126343

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.070802
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGATACG ATTTGCTCGT CTTTCTCGCA GCCTCCGTCG TCGTCACCCC CCTCGCCAAA 
TCTTTGAACG TCACACCTAT TTTGGGATAC CTGTTGGCGG GGGCAATCCT GGGACCCAAC 
GGACTAGACC TCTTTGCCAA TTCCAAAGCC GACATTGAAC TCGGGGACGT CGGCATTTTG 
TTTTTACTTT TCAGCGAAGG CCTCGAAGTC ACGCAACCGC GCCTGAAAAA ACTCACCAAT 
TACCTCCCAC TCGGAATTGC GCAAATCTCA CTCGTCACGG CCGTCATTAC CGGCGTCTTC 
ATGTCCGATT TACCCGAATG GACGGCGACC GTCTTTGCAA TCGATCCCAC GCTACTCGGG 
ATTCCCCCGA CCGAAGCCGT CGTACTGGCA CTCATTGGTT GCTTGTCCAC ATCGGCTTTC 
ATTTTCCCCG TCCTGAAGGA ACGCTCCTGG GAAGACGAAG AATCCGGCGA AGCCGCCACG 
TCAATTTTGC TGCTGCAAGA CCTTTTGGTC GCACCACTCT TGGTCCTTTT GCCATACTTG 
GCCGGCGATA CCGCCACCGA TTACCTCGCC ATTGGATTTC TCACGGCCAA GGCAACGCTG 
GGCTTTGGTG CCGTACTTTA CGTGGGTAGT TTAGTCCTAC AGAATGTCTT TCGTGTGGTC 
TCCACCGCAC AATCCAGTGA AACCTTTGTC GCGCTCTGTT TACTGGTTAG TGCCGGTATG 
GGTGCCATTG CCAAATACTT TGGTCTGACC GACACCGCCG GGGCTTTTGC CGCCGGTGTT 
TTGCTCGCCA ACACCAATTA CCGCGCCCAA ATTCAGGCGG ACATTCTGCC CTTCAAGGGT 
ATCTTATTGG GAATTTTCTT CATGGGCGCG GGTTCCAATT TTGACGTCGA ATTGGTCGTT 
CGCGAGTGGC CCACTATTGC GATTGGTTGT GTCACTCTGT TGGCGCTCAA GGCGTTTACC 
TTGGGTGCCG CCACACGAGT TCCGCACTGG ATGGAACCCA ACCGGCTACC CACCGCGGAT 
GCCATCCGGG TGAGTCTCTT GCTGGCCGGC GGTGGCGAAT TCGCCTTTGT CGTGCTGGCT 
CTGGCAGAAT CACTCGATAT CATCCCGGCC AGTTTATCCG CCATTGTTAC GGCAATTGTG 
TTAATTACTA TGGGATTGAC TCCTTTGCTC GGAGATCTGG CGGTAATATT GTCCGAGCCG 
CTGCTACCGT ACAAGGAAGA AGAGAAGTTA ATGGCCCTTA ACGGGAGTAA CGGTGCGGTT 
GTCCCGGAAC GCGAAATTCC ACACGTGGCG AAGGAGGCGG TGGTGATTTG TGGCTATGGC 
GAAGTCGGAC AGAATACCGT CCGCGTGCTG GGCAAACAAA AGGAAAAGGC CGGCATGATC 
AAATCCAGCT ACCTGAAAGA TGAAGTTCCC AGCGTCGTGG CCTTTGACGT CGATCCTTCC 
CTATCGGATA CTGCGCTACG ACCGTCCCGC AATACCGCCG TCTTATTCGG TAACGCCGCC 
AACCCCGAAG TAATCCGTTC CAGCGGCATT TCTCAGCCTT CCGCCATCTA CGTCACGTAC 
GAAGACTTTG GTCGTGTCCA ATCCGCCACA GCGCGTTTGC GGGCCGCCTT TGCCACCGTC 
CCCATTTTTG CCCGCGCCGC TACCCGGGCC GAAGTAAGTG CCTTGGAAGA GGCCGGGGCA 
ACACAAGTCG TGGTAGAGTC CGATGAATTG CCCCGATCCG CCTTTGCTCT GCTGGAAGGT 
GTATGGCAGG GCAACTTGCC CGGCAAGATT TTCAATTCTC CGGAACATTT TCGGGCAGAA 
GCCGCAGAAG CGGCTGGTAT CTCCACCGGT GAAGTCGAGG ACCTGCTGGA AATGTACCAA 
GCCATGGATC AGGATAAGAC CGGAACTGTC TGTCCAACCG AGATTGAAGC ATTGTTGGAA 
CGTTCCGGAA CTTGGATTGC CTCGGACGAC GAAATTCGAC AGCTGGATTC TTGGATTGAA 
AGTACCTTGG CCGGAAAGGA TCCAGTGGAT GCTCTGGAAT GGTGTCGACT GTACGGACGC 
GCCCCCGATT TTGTAAAACG AGCATTCGGT GGTGATCTAG CCCGCAAGCG GAAACAAAGA 
GAAGAAGCAT AG 

 

Protein sequence

MGYDLLVFLA ASVVVTPLAK SLNVTPILGY LLAGAILGPN GLDLFANSKA DIELGDVGIL 
FLLFSEGLEV TQPRLKKLTN YLPLGIAQIS LVTAVITGVF MSDLPEWTAT VFAIDPTLLG 
IPPTEAVVLA LIGCLSTSAF IFPVLKERSW EDEESGEAAT SILLLQDLLV APLLVLLPYL 
AGDTATDYLA IGFLTAKATL GFGAVLYVGS LVLQNVFRVV STAQSSETFV ALCLLVSAGM 
GAIAKYFGLT DTAGAFAAGV LLANTNYRAQ IQADILPFKG ILLGIFFMGA GSNFDVELVV 
REWPTIAIGC VTLLALKAFT LGAATRVPHW MEPNRLPTAD AIRVSLLLAG GGEFAFVVLA 
LAESLDIIPA SLSAIVTAIV LITMGLTPLL GDLAVILSEP LLPYKEEEKL MALNGSNGAV 
VPEREIPHVA KEAVVICGYG EVGQNTVRVL GKQKEKAGMI KSSYLKDEVP SVVAFDVDPS 
LSDTALRPSR NTAVLFGNAA NPEVIRSSGI SQPSAIYVTY EDFGRVQSAT ARLRAAFATV 
PIFARAATRA EVSALEEAGA TQVVVESDEL PRSAFALLEG VWQGNLPGKI FNSPEHFRAE 
AAEAAGISTG EVEDLLEMYQ AMDQDKTGTV CPTEIEALLE RSGTWIASDD EIRQLDSWIE 
STLAGKDPVD ALEWCRLYGR APDFVKRAFG GDLARKRKQR EEA