Gene PHATRDRAFT_39266 details

Gene Information

• Locus tag: PHATRDRAFT_39266
• ID: 7195014
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011687
• Strand: +
• Start bp: 71956
• End bp: 72570
• Gene Length: 615 bp
• Protein Length: 204 aa
• GC content: 59%
• Product: predicted protein
• Protein accession: XP_002183283
• Protein GI: 219126060

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.0536353
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGACGG AAACGACTCC AATGCCTGCT CCTTCTTCTC CGCAGTCCTC CACTAGGACT 
GTATCGGACA CCACCAGTCC GACGGAAACC TCAGCGGCAC CGGATCCGTT CCAAGCCGTT 
CTCTACGCCA GTAGTCAGCT TTCCATCGTT GACACCTTAT CCAAACTCGT CCGGACGCTA 
TCCACAACGG TATCTCTCTG CATGCCGGAC ACGGGCACAA CGGCGACGAC GGCCGCCGAC 
TCCGTGCGGG ACGCCGTTGC CCGACTCGTC GAACGCCAGG AACGCACTAC CGCACACGTC 
GTGCGGCACA TTATGGACCT TTACCAGTCC CTCGGCGAAC GCGACGCCGA ACTCGCGCAA 
CTCCGACAGG AACGGGACGC CCTACGCGAG CGCGTCGCCG TCCTCGGTGA GTGCCTCGCC 
TACGGAACAC ACACGCACGG ATCGCCCTCC ACCGTCACCG CCGCCAACAC GGATGATCTT 
TACAGTGCAC CCGGATTACA AAAAAGTCCC AGAAAGCATT CCGGTAAGCG GGTCAATTCG 
CAACACAGTC GCACGAACCT CATTCCCTTT GAAATTGTGC TGGAAGAGTA CCAAGAAGAA 
CGGGTGGAGT TGTAG 

 

Protein sequence

MTTETTPMPA PSSPQSSTRT VSDTTSPTET SAAPDPFQAV LYASSQLSIV DTLSKLVRTL 
STTVSLCMPD TGTTATTAAD SVRDAVARLV ERQERTTAHV VRHIMDLYQS LGERDAELAQ 
LRQERDALRE RVAVLGECLA YGTHTHGSPS TVTAANTDDL YSAPGLQKSP RKHSGKRVNS 
QHSRTNLIPF EIVLEEYQEE RVEL