Gene PHATRDRAFT_39252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_39252 
Symbol 
ID7195188 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp33612 
End bp34072 
Gene Length461 bp 
Protein Length101 aa 
Translation table 
GC content47% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183276 
Protein GI219126045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGCA CTAAACTGTA AGTAGAGAGA TATCGAGGCT TCTAGTGTAA ACGAAGGTAT 
TGCAAGTAGT GCATAATGAC AAATCGTTCC CCCGGGGACG ACTTCTTTGT GCTGTGATTT
GTAACTCGTG TTTTTTTGTT GCTCATCTTC TTTTTTCCCT TGGCGCTTGC AGCTATCTTC
GCGTGGAGCG CCGCAACCAA ACGTTTTGCC TTCTCTGTGA GACGTCCGAT ACCATTGCTA
GCCTCAAAAC GCAGCTAGCA CTTGCCGCTT CTCAACATTC GACGGATGGA GTCGATGCCG
ACCAAATGCG ACTACTGTTA GACACCACAG TATTGGAAGA CGATAGTACA ATCGCAGGAC
TTGAACTCAA AGATGATGCC GTCTTGTATT TGGTTTACGC CGTGGCGGAC AATGAGTACG
AATCAGTTGA TGTCGTTTCG ACGGCCTTTC AAGAGGGATA G
 
Protein sequence
MSSTKLYLRV ERRNQTFCLL CETSDTIASL KTQLALAASQ HSTDGVDADQ MRLLLDTTVL 
EDDSTIAGLE LKDDAVLYLV YAVADNEYES VDVVSTAFQE G