Gene PHATRDRAFT_22819 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_22819 
Symbol 
ID7195158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp542861 
End bp544254 
Gene Length1394 bp 
Protein Length185 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183376 
Protein GI219126254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.134884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTTCCACCAA GGTAAGCATC GAGCAACAAT GTTGTCGTTG TGTGTCACGA GAAATCATTC 
CGGTTTGGGC GAATCCTTAC GATAAACAGA ACGGATCGGG GAGCGTGGCA ACGGTCTGCC
GACACGGCAG GGCCACCAAA GGTGTCACGA TTTCCCGTGA CGAAGTATCT TCTCGGATTT
CTCGGAATGT CCAATGATCG ACGTTTATCC CAGGTGACGC TCCGGCATCC ACCATCTCCA
CAAAATCATT ATCGACGTCG ACGACAAATA ACAGATCCTA CCGTCTGGCC TCGCGTTCAT
ATTTGCGACA GAGAGTCGCC AAGAGTGTCG GGATCGAAGG CTCCTCATTG TGGTTGCTTG
TTTGGACCTA CGGCACGTTC GTGCTTACGG ATCACGCACC GCATGGAGAT CTTCGTCCCG
ACGCTTGCAT GGGTGACAAC TCTTACTCTT GAACGCTATA ACAATTCCTT TTTGCGTTCT
ATTTGAGTAT GTTCCAATCC TTTTTATCTG ATGGGTGACA TAATTCGAAC GCAAACAAGA
AGAAATATTC CATGCACGCC GACGAGGCTG TTTATGGGTC GACTCGTTTA CCGCACGAAC
GTGTCCCCTA TGCCGTCTCT CACACCTACT CCTCCTTTCT CTACTGCTTC GGAATCCGCC
ACAGTGTCGT CCCCGTCCCA CTGCAACATT TCGGCTCCGT CTGTACCATG TCTGGACTTT
GGGCTCGTTA CAACTCCATG CTGGACGCTC AGCCCCTCTT GACCAAGGCC TTGACGTCCA
TGACCGGCTT CTCGCTCGGG GACATTCTCG CCCAGTGCTT TATTGAAGAA GGCGACAAAG
GCTACGATCC GATGCGTACC TTCCGCATGG GTTCCTTTGG TTTCCTCCTG CACGGAACCA
CCGGACACTA CTTTTACGGA TTTTTGGATT CCAAGCTTCC CGGCACCGCC CCCATGACGG
TCGCTTCCAA AGTTGCCATC GATCAGACCA TCTGGAATCC CATCTTTGGC TGCATGTTCT
TTGGCTATCT CAATCTCATG GAGGGAAAGT CCCTGGACGA TTACACCACC AAGATCAAGA
CGGATCTGAA AACAGCTGTC ATGGGGAGTT GGGCCGTCTG GGTGCCTGCC CACACCATCA
ACTTTGCCTT TGTCCCACCG GCTCAGCGCT TGTTGTACAT TAATACGATT CAGATTGGAT
ACAACGTCTT TCTCTCCTTC TTGGGGAACA AGAGCGTGGA AGAAGAACCC AAGAAGGAAC
TCTAAACATG CGTCGTGGCC AAAGCAACTG GAACACGCGC ATTAAAATTT CCAACATATG
TGCGTTGTCG GTGGCGTGCT TTTGCGCGGG TAGATAAAGC CGTGTACCAA TAGATCTTGG
GTTTACTAGT CGTG
 
Protein sequence
MSGLWARYNS MLDAQPLLTK ALTSMTGFSL GDILAQCFIE EGDKGYDPMR TFRMGSFGFL 
LHGTTGHYFY GFLDSKLPGT APMTVASKVA IDQTIWNPIF GCMFFGYLNL MEGKSLDDYT
TKIKTDLKTA VMGSWAVWVP AHTINFAFVP PAQRLLYINT IQIGYNVFLS FLGNKSVEEE
PKKEL