Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_22819 |
Symbol | |
ID | 7195158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | + |
Start bp | 542861 |
End bp | 544254 |
Gene Length | 1394 bp |
Protein Length | 185 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183376 |
Protein GI | 219126254 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.134884 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | CTTCCACCAA GGTAAGCATC GAGCAACAAT GTTGTCGTTG TGTGTCACGA GAAATCATTC CGGTTTGGGC GAATCCTTAC GATAAACAGA ACGGATCGGG GAGCGTGGCA ACGGTCTGCC GACACGGCAG GGCCACCAAA GGTGTCACGA TTTCCCGTGA CGAAGTATCT TCTCGGATTT CTCGGAATGT CCAATGATCG ACGTTTATCC CAGGTGACGC TCCGGCATCC ACCATCTCCA CAAAATCATT ATCGACGTCG ACGACAAATA ACAGATCCTA CCGTCTGGCC TCGCGTTCAT ATTTGCGACA GAGAGTCGCC AAGAGTGTCG GGATCGAAGG CTCCTCATTG TGGTTGCTTG TTTGGACCTA CGGCACGTTC GTGCTTACGG ATCACGCACC GCATGGAGAT CTTCGTCCCG ACGCTTGCAT GGGTGACAAC TCTTACTCTT GAACGCTATA ACAATTCCTT TTTGCGTTCT ATTTGAGTAT GTTCCAATCC TTTTTATCTG ATGGGTGACA TAATTCGAAC GCAAACAAGA AGAAATATTC CATGCACGCC GACGAGGCTG TTTATGGGTC GACTCGTTTA CCGCACGAAC GTGTCCCCTA TGCCGTCTCT CACACCTACT CCTCCTTTCT CTACTGCTTC GGAATCCGCC ACAGTGTCGT CCCCGTCCCA CTGCAACATT TCGGCTCCGT CTGTACCATG TCTGGACTTT GGGCTCGTTA CAACTCCATG CTGGACGCTC AGCCCCTCTT GACCAAGGCC TTGACGTCCA TGACCGGCTT CTCGCTCGGG GACATTCTCG CCCAGTGCTT TATTGAAGAA GGCGACAAAG GCTACGATCC GATGCGTACC TTCCGCATGG GTTCCTTTGG TTTCCTCCTG CACGGAACCA CCGGACACTA CTTTTACGGA TTTTTGGATT CCAAGCTTCC CGGCACCGCC CCCATGACGG TCGCTTCCAA AGTTGCCATC GATCAGACCA TCTGGAATCC CATCTTTGGC TGCATGTTCT TTGGCTATCT CAATCTCATG GAGGGAAAGT CCCTGGACGA TTACACCACC AAGATCAAGA CGGATCTGAA AACAGCTGTC ATGGGGAGTT GGGCCGTCTG GGTGCCTGCC CACACCATCA ACTTTGCCTT TGTCCCACCG GCTCAGCGCT TGTTGTACAT TAATACGATT CAGATTGGAT ACAACGTCTT TCTCTCCTTC TTGGGGAACA AGAGCGTGGA AGAAGAACCC AAGAAGGAAC TCTAAACATG CGTCGTGGCC AAAGCAACTG GAACACGCGC ATTAAAATTT CCAACATATG TGCGTTGTCG GTGGCGTGCT TTTGCGCGGG TAGATAAAGC CGTGTACCAA TAGATCTTGG GTTTACTAGT CGTG
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Protein sequence | MSGLWARYNS MLDAQPLLTK ALTSMTGFSL GDILAQCFIE EGDKGYDPMR TFRMGSFGFL LHGTTGHYFY GFLDSKLPGT APMTVASKVA IDQTIWNPIF GCMFFGYLNL MEGKSLDDYT TKIKTDLKTA VMGSWAVWVP AHTINFAFVP PAQRLLYINT IQIGYNVFLS FLGNKSVEEE PKKEL
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