Gene PHATRDRAFT_15479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15479 
Symbol 
ID7194947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp505421 
End bp506401 
Gene Length981 bp 
Protein Length327 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183496 
Protein GI219126504 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0798315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTAGGTTCCG GAATTTCGGG ACTGGTGCGA CTAGTCACCC ATAAGGCAAC CGACATTAAG 
TATGCTGTAA AGGTCCTCGA TTTGGGATTG GTAGATACCG CTGAAGGACT ACGCCAGTTG
CGCGAGGAAA TCTTCATCAT GTGTCAGCTT GATCACCCTA ACATTGTTCG CTTGGAAGAA
GTCTACGAGA GTCACTCGGA GATTTATCTC GTACAAGAAT TGTGCTTAGG TGGTGAACTG
TTTGACCGTT TGGACGAGCA GCCAGACTAT CACTACACGG AGGCCGAGTG CGCGCGTTTG
GTAAAACAAA TGCTCAGTGC CGTGCGCTAC TTGCACTCCA AAGGAATCAT TCACCGCGAT
CTCAAGCTGG AGAACTTTCT CTTCTCGAGC AAGTCCTCCG ACTCGGAACT TAAAATGATC
GACTTTGGAC TATCCAAACA TTTCCGATAC GGGGAAATCC AGCACGAGGC CGTTGGAACC
CCGTACACTG TCGCTCCCGA AGTTATTCAC GGATCGTACG ACGAGCGGTG CGATATCTGG
GCGATTGGTG TCATTTCCTT TCTACTCCTT TCTGGTGACC CTCCCTTTGG AGGCTGCGGT
GGACCGGAAC CCCTCATGAC TGTCCGATCG AATATTCTGC GTGGTCACTA TGCGTTCGAA
CCTGAAGATA TTTGGGCAAA CGTATCTACG CTGGCGCAAG ACTTTATTAA AGCCGTACTC
GTGACCAATC CGCAACAACG TCCGACCGCT CGGGAAGCCC AAAAGCATCG ATGGCTGCAA
GAATGGGCCT CGCGCTCCCG CAAGGGAAAC GACAACAACC TGAATCCAAA CGTGGTCAAG
GCATTAGTCA ATTTCAAAGA GTTTTCCGAC ATGCGCAAAC TGCTTTGCGA AGTTTTGAGC
TTCACGCTGT TGCCCTACCA GATTAAGGAA CTGCGACGGG AATTTGAAAA AATGGACACG
GATGGTTCCG GAGAAATTTC T
 
Protein sequence
LGSGISGLVR LVTHKATDIK YAVKVLDLGL VDTAEGLRQL REEIFIMCQL DHPNIVRLEE 
VYESHSEIYL VQELCLGGEL FDRLDEQPDY HYTEAECARL VKQMLSAVRY LHSKGIIHRD
LKLENFLFSS KSSDSELKMI DFGLSKHFRY GEIQHEAVGT PYTVAPEVIH GSYDERCDIW
AIGVISFLLL SGDPPFGGCG GPEPLMTVRS NILRGHYAFE PEDIWANVST LAQDFIKAVL
VTNPQQRPTA REAQKHRWLQ EWASRSRKGN DNNLNPNVVK ALVNFKEFSD MRKLLCEVLS
FTLLPYQIKE LRREFEKMDT DGSGEIS