Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_15442 |
Symbol | |
ID | 7194960 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | + |
Start bp | 571599 |
End bp | 572657 |
Gene Length | 1059 bp |
Protein Length | 320 aa |
Translation table | |
GC content | 50% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183382 |
Protein GI | 219126266 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.374929 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAACA CGTCTTCGGA AGCCGCGGGC TGCGCGAAAA ATCCGGCCTT CGAAAAAACA ACCCAAAAAG GCCATTCAAA AGAACAGAAC CTTGAGTACG CAGTTTCGAG CATGCAAGGA AAGCGGCCGT CTATGGAAGA CAAGCATCTG TATTGCGTCG AACTTCCCGT ACACGGTAAA ATTCCTACAT TTCTGGTGGA TCACGCGATT TTTGCTGTTT TTGACGGACA TGGGGGTCCT TTTTCATCCA CATATGTGGA AGAACATTTT CTGCAAGTTC TCTCACGAAG ACCGGAGCTC GCCAGATATG CCGATATGCC TCCAACTGGT TCCAAAAGCC GAGCAGATGC CAACGGTATT ATGCTTCTCA AGCAGGCGCT GGTATCAACA TTTTTGATGC TTGACGAAAT GCTCATTCCG ATGCAGAAAC AGCGCAATGC CGCTATTTCA AGTGGAGAAC TAACGCCACC ACCTCTTGCA GCCGAAAGCG ATTCGGAAGA CGAAAACACT GCTGGAACGG ACTCCGGCAT CCCATTAAAG CTAAATGGGG AACGCTCAGG ATCTACTTGT GTGGCTGTTC TGTTGACACC AACGCACTTC GTCTGCGCCA ACACGGGAGA CTCTAGAGCC ATCCTGCGTA GGAACGGAAA GATTCTACCT CTCAGTTTTG ATCACAAGCC GGTAGAAGTA GGCGAACGAG CTCGCATTAC GAGCGCAGGC GGTGTCGTCA AGGGCAAACG GATTGATGGA GATCTCGCTG TTAGCAGAGG CTTTGGAGAT TATATGTACA AAAAAGATCC CGGGCTTGCT CCCGATCTGC AGAAAGTTAC AGTTGTTCCC GATCTCGTCG TCTACCCTCG TGACCAAGCT TTTGACGAAT TTATTCTTTT GGCATGTGAC GGAGTTTGGG ATGTTGCTAG CAATACGCAG TGCGCGGACA TTGTCCAGAA GCTACTTACC GAAGGAGAGA CAGATTTGGG AAACATATGT GAGGAGGCCT TGGACACTTG CCTCGATCGC CACAGCGGAG ACAACATGAC CGTTATGCTT GTGGGACTA
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Protein sequence | MGNTSSEAAG CAKNPAFEKT TQKGHSKEQN LEYAVSSMQG KRPSMEDKHL YCVELPVHGK IPTFLVDHAI FAVFDGHGGP FSSTYVEEHF LQALVSTFLM LDEMLIPMQK QRNAAISSGE LTPPPLAAES DSEDENTAGT DSGIPLKLNG ERSGSTCVAV LLTPTHFVCA NTGDSRAILR RNGKILPLSF DHKPVEVGER ARITSAGGVV KGKRIDGDLA VSRGFGDYMY KKDPGLAPDL QKVTVVPDLV VYPRDQAFDE FILLACDGVW DVASNTQCAD IVQKLLTEGE TDLGNICEEA LDTCLDRHSG DNMTVMLVGL
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