Gene PHATRDRAFT_15442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15442 
Symbol 
ID7194960 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp571599 
End bp572657 
Gene Length1059 bp 
Protein Length320 aa 
Translation table 
GC content50% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183382 
Protein GI219126266 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.374929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAACA CGTCTTCGGA AGCCGCGGGC TGCGCGAAAA ATCCGGCCTT CGAAAAAACA 
ACCCAAAAAG GCCATTCAAA AGAACAGAAC CTTGAGTACG CAGTTTCGAG CATGCAAGGA
AAGCGGCCGT CTATGGAAGA CAAGCATCTG TATTGCGTCG AACTTCCCGT ACACGGTAAA
ATTCCTACAT TTCTGGTGGA TCACGCGATT TTTGCTGTTT TTGACGGACA TGGGGGTCCT
TTTTCATCCA CATATGTGGA AGAACATTTT CTGCAAGTTC TCTCACGAAG ACCGGAGCTC
GCCAGATATG CCGATATGCC TCCAACTGGT TCCAAAAGCC GAGCAGATGC CAACGGTATT
ATGCTTCTCA AGCAGGCGCT GGTATCAACA TTTTTGATGC TTGACGAAAT GCTCATTCCG
ATGCAGAAAC AGCGCAATGC CGCTATTTCA AGTGGAGAAC TAACGCCACC ACCTCTTGCA
GCCGAAAGCG ATTCGGAAGA CGAAAACACT GCTGGAACGG ACTCCGGCAT CCCATTAAAG
CTAAATGGGG AACGCTCAGG ATCTACTTGT GTGGCTGTTC TGTTGACACC AACGCACTTC
GTCTGCGCCA ACACGGGAGA CTCTAGAGCC ATCCTGCGTA GGAACGGAAA GATTCTACCT
CTCAGTTTTG ATCACAAGCC GGTAGAAGTA GGCGAACGAG CTCGCATTAC GAGCGCAGGC
GGTGTCGTCA AGGGCAAACG GATTGATGGA GATCTCGCTG TTAGCAGAGG CTTTGGAGAT
TATATGTACA AAAAAGATCC CGGGCTTGCT CCCGATCTGC AGAAAGTTAC AGTTGTTCCC
GATCTCGTCG TCTACCCTCG TGACCAAGCT TTTGACGAAT TTATTCTTTT GGCATGTGAC
GGAGTTTGGG ATGTTGCTAG CAATACGCAG TGCGCGGACA TTGTCCAGAA GCTACTTACC
GAAGGAGAGA CAGATTTGGG AAACATATGT GAGGAGGCCT TGGACACTTG CCTCGATCGC
CACAGCGGAG ACAACATGAC CGTTATGCTT GTGGGACTA
 
Protein sequence
MGNTSSEAAG CAKNPAFEKT TQKGHSKEQN LEYAVSSMQG KRPSMEDKHL YCVELPVHGK 
IPTFLVDHAI FAVFDGHGGP FSSTYVEEHF LQALVSTFLM LDEMLIPMQK QRNAAISSGE
LTPPPLAAES DSEDENTAGT DSGIPLKLNG ERSGSTCVAV LLTPTHFVCA NTGDSRAILR
RNGKILPLSF DHKPVEVGER ARITSAGGVV KGKRIDGDLA VSRGFGDYMY KKDPGLAPDL
QKVTVVPDLV VYPRDQAFDE FILLACDGVW DVASNTQCAD IVQKLLTEGE TDLGNICEEA
LDTCLDRHSG DNMTVMLVGL