Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_15422 |
Symbol | |
ID | 7195121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | - |
Start bp | 341477 |
End bp | 342196 |
Gene Length | 720 bp |
Protein Length | 240 aa |
Translation table | |
GC content | 46% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183469 |
Protein GI | 219126448 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.484566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGAGA AGCAAAACCT CGTAGAAGTT TACGGATCGA AAAAGAAGCG GCGAGCAGAA GAGTCAGAAG TTATCATTCG ATTCAATCAA AAGCCTTCGG CAGGTATTGC TTACGCAGCA CAGTGTGGGC ATATTGACCC AATAGACGCA GTTGATGTCG CAGCATTTTT ACTGAAAAAC AAGGATATTT TTGAGAAAAC ACAAATCGGG GAATATTTAG GTCGCGAGGT GGAGTACCAA GGCGGGTTCT CTCTCAAAGT ACTGCATCAG TACGTCCGAC TGCTTGATTT TGCCGGTCTA GAGTTCGACG ACGCCATACG TTTCTTTCTG AGTGGCTTTC GTTTACCTGG TGAGGCACAG AAGGTAAGTA AACTTCTCTA TGTCTTCGCT CTGCCGTTTC TCTTGTCTCA TCTATTCACA CAATACGCTC AGATTGACCG CATCATGGAA AAATTTGCGG AACGGTTCAC TGAGCAGAAT CCTGAGGTCT TTCCCTCGGC AGATGTTGCC TTCATTCTGG CCTTTTCAAT CATAATGCTG AACACAGATT TGCACAACCC TGCGATCAAG GAAGAACGGC GAATGACAAA GGACGGTTTT ATCAGGAACA ATCGTGGTAT TTGTGATGGT CAAGACCTTC CCGAGGAGCT CTTGACGGGT GTTTTTGATC GCATCCAGAA TAACCCAATT AGTCTTAAGG AAGACGACGA GGCACGGGAA
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Protein sequence | MSEKQNLVEV YGSKKKRRAE ESEVIIRFNQ KPSAGIAYAA QCGHIDPIDA VDVAAFLLKN KDIFEKTQIG EYLGREVEYQ GGFSLKVLHQ YVRLLDFAGL EFDDAIRFFL SGFRLPGEAQ KVSKLLYVFA LPFLLSHLFT QYAQIDRIME KFAERFTEQN PEVFPSADVA FILAFSIIML NTDLHNPAIK EERRMTKDGF IRNNRGICDG QDLPEELLTG VFDRIQNNPI SLKEDDEARE
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