Gene PHATRDRAFT_15324 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15324 
Symbol 
ID7195084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp386269 
End bp387402 
Gene Length1134 bp 
Protein Length378 aa 
Translation table 
GC content56% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183477 
Protein GI219126465 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.101081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
CTCCGCCGAC ACCTGACGGT GTGGGATTTG ATACTCATTG GAGTCGGTGG CACCATTGGC 
TCCGGGATCT TTGTATTGAC GGGACAAATT GCCGCTCAAT CCGCTGGTCC TTTGACTTTT
CTGTCCTTTG CGATTGCCGG TATCGCCGCT TGTTGCTCCG GCGTGTGCTA CGCCGAATTA
TCGGCACGGA TTCCGGCCGC CGGATCGACC TACGTGTACG CCTATGTCTG TCTGGGAGAA
GTTGCGGCCG TCGTGGCGGC AGCCTGTCTC ACGCTCGAGT ACGGCGTCGC CGGGGCGGCC
GTCGCACGAT CCTGGGGTGA CAAGGTCGTG CTGTGGATGC AAACGTCCTT TGGCGTGTCC
GTGGCCTCCT GGATGATGCC CTGGGGCGTT AATCTTCCCG CCGCCGTCGT CTCGTTGGGA
TCAACCCTTT TGCTGTTGGC TGGCGTGCAA GAAAGTAAGA ATGTTTCGAA CGTGATTACG
TCGCTGAAAA TGGCGATTGT TGCGTTCATG ACCATTGGTG GCTTTATCCT CTACCAAAAA
GTCAACATGC AAGCTCCGTT GGCGCCGTTC GGAGTGGACG GGGTCTTACG GGGCGCCACA
ACCAGCTTTT TTGGATATCT CGGATACGAT GAAGTCTGTG TGGTAGCCGG GGAAGCTTTG
CATCCTGCGA GAGACATGCC CCGAGCCGTC TTGGGGACCA TTTCAATTGT CACGGTGTTC
TACGTGTTAT CGGCGCTAGC CTTGACCGGT ATGGTGCATT ACAGCGATAT TAGTCCGACG
TCGGGCTTTC CCGAAGCCTT TGCTACCCGA CACGTTATGT GGGCCTCGCA ACTGACGGCG
CTGGGGGAGC TCGTTACGCT ACCGGTCGTA GTACTGGTCT CCCTTATGGC CCAGCCGCGA
TTGACCTTTG GTATGGCCAG TGATGGCTTG CTACCGGCAA TTTTTGCCCA AGTGGATAGC
ACTGGAAATC TTCAAGGAGG AACATTGGTT TCTGGTTTGG TCATGACGTT CGTGGCAACG
TTTATCCCCT TTGTGTACTT AAATGATTTG ATCAGCGCTG GCATTCTCCT CGCCTTTAGC
ATGACCAACT CGTGTTTGCT GCTGTTGAGA TGCGAACCAC CGACTCGGCA ACCC
 
Protein sequence
LRRHLTVWDL ILIGVGGTIG SGIFVLTGQI AAQSAGPLTF LSFAIAGIAA CCSGVCYAEL 
SARIPAAGST YVYAYVCLGE VAAVVAAACL TLEYGVAGAA VARSWGDKVV LWMQTSFGVS
VASWMMPWGV NLPAAVVSLG STLLLLAGVQ ESKNVSNVIT SLKMAIVAFM TIGGFILYQK
VNMQAPLAPF GVDGVLRGAT TSFFGYLGYD EVCVVAGEAL HPARDMPRAV LGTISIVTVF
YVLSALALTG MVHYSDISPT SGFPEAFATR HVMWASQLTA LGELVTLPVV VLVSLMAQPR
LTFGMASDGL LPAIFAQVDS TGNLQGGTLV SGLVMTFVAT FIPFVYLNDL ISAGILLAFS
MTNSCLLLLR CEPPTRQP