Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_15320 |
Symbol | |
ID | 7194940 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011687 |
Strand | - |
Start bp | 476495 |
End bp | 477541 |
Gene Length | 1047 bp |
Protein Length | 289 aa |
Translation table | |
GC content | 51% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183491 |
Protein GI | 219126494 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GCTGGTTTGA CGCTCGGCTT ACTGGGCCTG GATCCGCTTC TGCTACTTAT AAAGGAACGC GCGGGTAGAA GCGAAAAGGA ACGTCGAATG GCGCGCAACT TGCTCCCTCT GGTACAACAG CATCACCGGC TTCTGGTAAC GCTGCTGCTC ATGAATTCCA TCGCCAACGA GGCTCTGCCT ATTTTCTTGG AAGGACTATT ATCGCCCACC GTCGCAGTTC TCGTCTCTGT CACGCTCGTA CTTTTCTTTG GAGAAATTAT TCCGTCGGCC ATCTTTACCG GGCCGAACCA GCTGCAAATT GCCAATCGAC TGGCACCGCT CGTTAAAGCC GCCATGTGTG TGTTGGGACC GATTGCCATT CCGATCGCCA AACTTCTCGA CTGGTTTCTA CACGACGATG ACGGGGAGTC TTTGTCGGCT TACAATCGGG GTGAACTGTC TGCTCTGATT CGTATTCAGT ATGAAGATCG CATGGCATCC AAACGCAGAC GAAAAGCCCA GCAACAAACA GTGATGGCCA ATCCTCATCA TGTGGGTGGC TTGGACTTGA CCGGCGCAAT CGGCGTGCGG GATCGCCTTG CAATTGACGA CGCTGTTCGT GCCACAGTGC GGCAGTTGGA GCATGCCGAA GTGTTGCACG AAATGTCCGC GCCGGTGCAG TCGGGAAGAC CTACATATGA ACGATCAACA AGCATTCACG TAGACGAAGT CACTATGGTG GAAGGAGCAC TGCAAATGAA AACTAAGGTA GCTGTTGATG TCTACACACC ATTGCGCAAA GCATTTTTGC TTTCAGACGA TACTCTCTTG ACCGAGAAAG AAATCGTGCA AATATATGCC TCAGGATATT CCCGTATCCC CATCTACCGG AAGGATCCAG AGGATCCGAC TTATAAGTCC AATGTGATCG GTGTTCTAAT TACAAAGCAA CTCATTGTCG TCAATTCCCG GGATAAGCGA CCGTTGCACA CGCTCCCACT TTATACTCCG CGGTGTGTCA GTCACGACAT GAGTCTAGTA GATCTTCTCA ATCAGTTCCA AACAGGA
|
Protein sequence | AGLTLGLLGL DPLLLLIKER AGRSEKERRM ARNLLPLVQQ HHRLLVTLLL MNSIANEALP IFLEGLLSPT VAVLVSVTLV LFFGEIIPSA IFTGPNQLQI ANRLAPLVKA AMCVLGPIAI PIAKLLDWFL HDDDGESLSA YNRGELSALI LLHEMSAPVQ SGRPTYERST SIHVDEVTMV EGALQMKTKV AVDVYTPLRK AFLLSDDTLL TEKEIVQIYA SGYSRIPIYR KDPEDPTYKS NVIGVLITKQ LIVVNSRDKR PLHTLPLYTP RCVSHDMSLV DLLNQFQTG
|
| |