Gene PHATRDRAFT_15320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15320 
Symbol 
ID7194940 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp476495 
End bp477541 
Gene Length1047 bp 
Protein Length289 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183491 
Protein GI219126494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GCTGGTTTGA CGCTCGGCTT ACTGGGCCTG GATCCGCTTC TGCTACTTAT AAAGGAACGC 
GCGGGTAGAA GCGAAAAGGA ACGTCGAATG GCGCGCAACT TGCTCCCTCT GGTACAACAG
CATCACCGGC TTCTGGTAAC GCTGCTGCTC ATGAATTCCA TCGCCAACGA GGCTCTGCCT
ATTTTCTTGG AAGGACTATT ATCGCCCACC GTCGCAGTTC TCGTCTCTGT CACGCTCGTA
CTTTTCTTTG GAGAAATTAT TCCGTCGGCC ATCTTTACCG GGCCGAACCA GCTGCAAATT
GCCAATCGAC TGGCACCGCT CGTTAAAGCC GCCATGTGTG TGTTGGGACC GATTGCCATT
CCGATCGCCA AACTTCTCGA CTGGTTTCTA CACGACGATG ACGGGGAGTC TTTGTCGGCT
TACAATCGGG GTGAACTGTC TGCTCTGATT CGTATTCAGT ATGAAGATCG CATGGCATCC
AAACGCAGAC GAAAAGCCCA GCAACAAACA GTGATGGCCA ATCCTCATCA TGTGGGTGGC
TTGGACTTGA CCGGCGCAAT CGGCGTGCGG GATCGCCTTG CAATTGACGA CGCTGTTCGT
GCCACAGTGC GGCAGTTGGA GCATGCCGAA GTGTTGCACG AAATGTCCGC GCCGGTGCAG
TCGGGAAGAC CTACATATGA ACGATCAACA AGCATTCACG TAGACGAAGT CACTATGGTG
GAAGGAGCAC TGCAAATGAA AACTAAGGTA GCTGTTGATG TCTACACACC ATTGCGCAAA
GCATTTTTGC TTTCAGACGA TACTCTCTTG ACCGAGAAAG AAATCGTGCA AATATATGCC
TCAGGATATT CCCGTATCCC CATCTACCGG AAGGATCCAG AGGATCCGAC TTATAAGTCC
AATGTGATCG GTGTTCTAAT TACAAAGCAA CTCATTGTCG TCAATTCCCG GGATAAGCGA
CCGTTGCACA CGCTCCCACT TTATACTCCG CGGTGTGTCA GTCACGACAT GAGTCTAGTA
GATCTTCTCA ATCAGTTCCA AACAGGA
 
Protein sequence
AGLTLGLLGL DPLLLLIKER AGRSEKERRM ARNLLPLVQQ HHRLLVTLLL MNSIANEALP 
IFLEGLLSPT VAVLVSVTLV LFFGEIIPSA IFTGPNQLQI ANRLAPLVKA AMCVLGPIAI
PIAKLLDWFL HDDDGESLSA YNRGELSALI LLHEMSAPVQ SGRPTYERST SIHVDEVTMV
EGALQMKTKV AVDVYTPLRK AFLLSDDTLL TEKEIVQIYA SGYSRIPIYR KDPEDPTYKS
NVIGVLITKQ LIVVNSRDKR PLHTLPLYTP RCVSHDMSLV DLLNQFQTG