Gene PHATRDRAFT_15294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPHATRDRAFT_15294 
Symbol 
ID7194966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePhaeodactylum tricornutum CCAP 1055/1 
KingdomEukaryota 
Replicon accessionNC_011687 
Strand
Start bp597559 
End bp598662 
Gene Length1104 bp 
Protein Length368 aa 
Translation table 
GC content51% 
IMG OID 
Productpredicted protein 
Protein accessionXP_002183388 
Protein GI219126278 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGCTCC TGCTTTCCGG CGGGGTCGAC TCATCAGTTG CACTCAATTT GCTGGTTCAG 
CAAGGTTACG ACGTTACGGC CTTCTACTTG AAAATCTGGT TGGAAGACGA GCTCGCTCAT
CTCGGCCATT GCCCCTGGGA AGACGACTAT CGGGTTTGCC AGGAAGTCTG CGAACAAGCC
GGTATCCCAC TGGAAACCGT CAGTTTGCAA AATGCCTACA AATCGCGTGT AATTGCTTAC
ACAGTCCACG AAGCCGAACA AGGACGGACA CCCAATCCCG ATATCATGTG CAACAGCCGC
GTCAAGTTCG GCTGCTTCTA CGAGGCTATC GATCAACGAG AGTTTGACTT TGTCGCATCC
GGACACTACG CACAGCTAGT CAAGGATACA GAAACCGGAT CCATGCGCTT GCTTCGAGCA
CCTGACCCCA TCAAGGATCA ATCCTACTTT TTGTGCACCT TGACGCAAGA TCAACTACAG
CGTGTTTTGT TTCCCATTGG TCATCTGCAA AAGTCACAAG TCCGAGACCT TGCTGACGAA
TTTATCCTAC CGAATCGTCT TCGTCCAGAC TCTCAAGGAT TGTGCTTTTT GGGCAAGGTT
AAGTTTGACG AATTTCTTGC CGTGTATTTA GGGACCAGAC CGGGTCCGAT AGTGGATGCG
GGGACCGGGG ATGTAGTGGG TCAACACCAT GGGGTTTGGT ATCATACGGT GGGCCAACGC
AAAGGCATTG GTCGAGTATT AGATCCACTG GCCACGTCCC GTGGACCTTG GTACGTAGTA
GCCAAAGATC CCGGAAAAGA TGTGGTGTAT TGTTCCAACC AGTATGATGA AGACATTTTC
ACCGCTTCAA GATCCGAATT TGCCGTTGAA AATATTCATT GGATTGCGGG TCAAGCGCCG
CCAAACCTCC TAAAAGGAGA CGGCGGACGA TTCGTCATGA AGATACGACA CGGGCCAGAT
CTTGTGAAAG GAACGCTGCG TTTGACCAAT ACGGCAGGCG AAGGTGACGT AAAGCTGGAT
TCTAAGGATG GCGGCTTAGC ACCGGGTCAA TACGTTGTTT TCTATAAAGA CGAAGAGTGT
CTGGGCGCGG GCGTGATTAG CGAA
 
Protein sequence
VALLLSGGVD SSVALNLLVQ QGYDVTAFYL KIWLEDELAH LGHCPWEDDY RVCQEVCEQA 
GIPLETVSLQ NAYKSRVIAY TVHEAEQGRT PNPDIMCNSR VKFGCFYEAI DQREFDFVAS
GHYAQLVKDT ETGSMRLLRA PDPIKDQSYF LCTLTQDQLQ RVLFPIGHLQ KSQVRDLADE
FILPNRLRPD SQGLCFLGKV KFDEFLAVYL GTRPGPIVDA GTGDVVGQHH GVWYHTVGQR
KGIGRVLDPL ATSRGPWYVV AKDPGKDVVY CSNQYDEDIF TASRSEFAVE NIHWIAGQAP
PNLLKGDGGR FVMKIRHGPD LVKGTLRLTN TAGEGDVKLD SKDGGLAPGQ YVVFYKDEEC
LGAGVISE