| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48664 |
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| Symbol | |
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| ID | 7194902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011686 |
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| Strand | - |
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| Start bp | 517656 |
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| End bp | 519392 |
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| Gene Length | 1737 bp |
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| Protein Length | 504 aa |
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| Translation table | |
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| GC content | 56% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183239 |
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| Protein GI | 219125965 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00116938 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AGCAGGCAAC CCGACGTACG TTCAATGAAA CCAAATCCCC ATGATTACCG TTACTGTTCG
TTTTGGAATC TACGTGATTT ACTGCTAGAC GCAACGCATC GTGACGTGCC CTGATACGGC
GCTTTCTCCT TTTTGTCTCT GTCAATCGTC CTTCCTTGCG TCACTCCCAC CTTGCAACAA
ACAACCGAAA ACGACACCAA CGACCACAAC AACCACACCG CAATGGCGTC GGCGTATCGG
CAAGCCCGGG AGGCCAGCGA ACCGGCAGCC GTCCACGACG GTACCACGAA GACCACCGTC
ATGGACAGTA GTAGCAGCAT GAGCGTGAGT AGTAGTAGTA GCGGTCCGAC GACGACGACT
CCTCGTAGTA CGGCGCTTGG GAGTGCCAGC AGCGCTTTGC GCACCGTCAC CGGTACACCC
CTCGTCGTCG CCCACGACGT GCCGTTCAAC TGGGTTGACG GTCTCCCCTA CATCCCGACA
CGGTTTGCCG ATTTGGCCGA TCCCCAATCC ATCCAACGCG TCGTGGCTCT TCTCCTCCAA
GCCACCCTTT CCAACACCAA CACCACCACT CCCGACTCGA CCGACCACGC ACCCGACCAA
CCCCCTTCCG TACACTCGCC GAACCCCACT CCACCGACCT CCACCGTCGC CATTGCTCCG
GACGATTGGA ACGTGATTTA TTCCAGTTTC CAACTCGAAC AAGTCGCGGG GGGAATTACC
AATACACTCG TCCGCGTCAC CAATTTGTCC AGTTTTTTCG ATCCCACGAC GACTCCCGAT
TCCGTCCTCG TGCGGATCTT TGGAGCCGTC GGTTTGATTG ATCGGGACGA AGAAACACAC
GTCTTGGCTC GGTTGGCCGT TCGGGGCATC GCTCCCGCCT ATTACGGACG TTTCGGGAAC
GGCCGTTTGG AAGCATGGCG GGATGGGATG CGGGCTCTCG CGACCTACGA ACTCGGCGAA
CCCGACAAAC TCGTACCCAT TGCCCGGGAA GTTGCTCGAC TCCATCACAC TCATCTACAC
GATATCGACC GCAGTGATGC CGATAACGAA TCCACTCCCC AAAACAACGA CAACAACGAC
AGCATTACAT CCACGCACGA GCCTACCTTG TGGACGCAAT TGTACGATTG GTACGACCAG
GCCTTGGTCG CCACCGCTTC CACCAAGTCG GTCACACTCG AGTTGTCCAG TTACCGGGCG
GAACTGGACT GGGTCCGTTC CCTGACCCCA CCGGACACAC CCATTGCGTT TTGTCACAAC
GACCTGCTCG CCGCCAATAT TCTTTACAAC GACAATCCCG ACCCTACCGA TCCCCGGGTG
ATTCAACTGA TTGATTTCGA ATACGGGGGG ACCAATTACG TCGCCTTTGA CATTGCGAAC
CACTTTAACG AATTTGCCGG AGGTCCCCCG ACGCATCCCG TACCGGACTA CGACAATCTA
CCCACACCGG CACAACAATT ACTCTTTGCC GAAACCTATC TCGAACAAGA ACAAGAACTG
CAACAGCAAC CAGGCGCGAC AACCACGGCC TGGAAGTCGG CACGGGAATT GTTGGACCAC
GTACGGATCT TTGCCCTCGC CAATCACCTG TACTGGGGTT TGTGGGCCGT TAACCAAGCC
GCCACCGAAG GGTGTGACGC ATTCGATTAC CGTACCTACG CTGTCAATCG ACTGAAACAG
TACCACGTGG TCAAACAGGA ATACGCAGAT TCCACCGCGA TCAATGGTCA CGTGTAA
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| Protein sequence | MASAYRQARE ASEPAAVHDG TTKTTVMDSS SSMSVSSSSS GPTTTTPRST ALGSASSALR
TVTGTPLVVA HDVPFNWVDG LPYIPTRFAD LADPQSIQRV VALLLQATLS NTNTTTPDST
DHAPDQPPSV HSPNPTPPTS TVAIAPDDWN VIYSSFQLEQ VAGGITNTLV RVTNLSSFFD
PTTTPDSVLV RIFGAVGLID RDEETHVLAR LAVRGIAPAY YGRFGNGRLE AWRDGMRALA
TYELGEPDKL VPIAREVARL HHTHLHDIDR SDADNESTPQ NNDNNDSITS THEPTLWTQL
YDWYDQALVA TASTKSVTLE LSSYRAELDW VRSLTPPDTP IAFCHNDLLA ANILYNDNPD
PTDPRVIQLI DFEYGGTNYV AFDIANHFNE FAGGPPTHPV PDYDNLPTPA QQLLFAETYL
EQEQELQQQP GATTTAWKSA RELLDHVRIF ALANHLYWGL WAVNQAATEG CDAFDYRTYA
VNRLKQYHVV KQEYADSTAI NGHV
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