| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48580 |
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| Symbol | |
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| ID | 7194740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011686 |
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| Strand | + |
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| Start bp | 260238 |
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| End bp | 261668 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | |
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| GC content | 55% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183060 |
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| Protein GI | 219125592 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000300421 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGCTG CGTCCGCCCT CAAATGCGCA TCCTATGAGG GAAGGAGTGG CGTAGCTGCC
GCGGTCCGGC TGGTGTCGTC AATGCGTACT CGCAACTCCG AGACGATCGG TGCATTGTCG
CCGTACTGCT ACGATCACAC CCACTTGCCA TTGTCTACAA CAAGGGCTCA GGCTTTCTCG
GCTGCTTCCG CCGTGAGAGA CTTTGCAGAT CCGCAGGGGG CGGCCCGCAA ACACCGTCCG
ATTTACATCG CGGCGACGAG GCAGCACGTG GGCAAGACCT CGGTCAGTCT CGCACTGATG
AAAGGATTGC AGCGCCGTGT TCCCAAAGTA GGTTTTCTAA AACCCGTTGG ACAGCATTCC
GTACGAATTG CCGAGCTCGA CGGCAGTGTC GTGACGGTCG ACAAGGACAC CGCTTTGATC
GTTCAACACT TTGGACTTAC ACGGCATCAG ACATTGCAAG ATGCCAGTCC AGTCCTCATT
CCGCCGGGGT ACACAAAAGA TTACGTTGAC GGGAAAATTA CGCTCGATAC TCAACGTGCC
TCCATCGGAA AAAGTTTTCA ACGCGTCGCT TCCTTTGCCG ATATTGTCCT CTGCGAAGGA
ACCGGACATT GCGCCGTCGG TAGCATCGTA GACGCCAGTA ACGCCGCCGT CGCGTCTTGG
CTCGGCGCCC GGATGGTCCT TGTGGCCAAC GGTGGTCTGG GGAATTCTGT GGACGAACTT
GAACTCAATA AGGCCTTGTG CGACAAACAT GGGGTTGAGA TTGCCGGCGT TATCATCAAC
AAGGTCTTGC CCGAAAAGTA CGAACAGACA AAATACTATC TGGAGAAAGC ATTGCACGAT
CGGTGGGGTA TTCCCTTGCT GGGATGCGTT CCGGATCGGG CGTTTTTAGG ATGTCCCGCC
TTGGCCGATC TAGAGCGTCT CTTCCCCGGC GCGATGTTAG TTTCTGGGCT CGATCATCGA
CTGCGACATT ATACGGTGCA AGATTTGAAC CTCGTCGCCA CATCGCTCGA AGTCTTTTTG
CGCAATCTGC GAACCGATCC CTCCCGCACG CTTTATGTTT GTCACGCTTC CCGAAACGAT
ATCTTGCTCG GCTTCCTTAT GGAAAGTCAG CAACGGCCGG ACTGGGAAGC CGCGTTAGTT
GTCACAGGCT GTCACGATTA TCCCGTCAGT GACCAGGTTT TGCAAATCAT CACTTCCATG
CCTTCGGCCC CACCGGTGCT CTTGGCATCG CCACCGACGC GACAAGTCAT GCACGATATA
CACCACTTTA CCCCAAAATT GAATTTTGAG GATGGACACC GCGTCGAAGC CGCTGCCGCT
CACTACGAAC CCTACATTGA CTTCGATCTT CTTTTGTCGA GGGTCGGAAC GACGTCTACT
GGCTCCTCGA AATCTACGTC GAAAGCCGGC CTTGCAGTCG CAGTGCCGTA G
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| Protein sequence | MIAASALKCA SYEGRSGVAA AVRLVSSMRT RNSETIGALS PYCYDHTHLP LSTTRAQAFS
AASAVRDFAD PQGAARKHRP IYIAATRQHV GKTSVSLALM KGLQRRVPKV GFLKPVGQHS
VRIAELDGSV VTVDKDTALI VQHFGLTRHQ TLQDASPVLI PPGYTKDYVD GKITLDTQRA
SIGKSFQRVA SFADIVLCEG TGHCAVGSIV DASNAAVASW LGARMVLVAN GGLGNSVDEL
ELNKALCDKH GVEIAGVIIN KVLPEKYEQT KYYLEKALHD RWGIPLLGCV PDRAFLGCPA
LADLERLFPG AMLVSGLDHR LRHYTVQDLN LVATSLEVFL RNLRTDPSRT LYVCHASRND
ILLGFLMESQ QRPDWEAALV VTGCHDYPVS DQVLQIITSM PSAPPVLLAS PPTRQVMHDI
HHFTPKLNFE DGHRVEAAAA HYEPYIDFDL LLSRVGTTST GSSKSTSKAG LAVAVP
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