Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PHATRDRAFT_48579 |
Symbol | |
ID | 7194739 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
Kingdom | Eukaryota |
Replicon accession | NC_011686 |
Strand | - |
Start bp | 254779 |
End bp | 259022 |
Gene Length | 4244 bp |
Protein Length | 276 aa |
Translation table | |
GC content | 53% |
IMG OID | |
Product | predicted protein |
Protein accession | XP_002183191 |
Protein GI | 219125864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000247197 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTTTA CGTTCCTCTC TCTCCACCTT GGGGTGACTC TCATTTCCTT GGAAATCAGA GGATTTGATG CTGCAAGAAG TGAATTGATC TCGTTTTCCG CGCAACTTCG TGGTCGGGTT TTGCAGCAAA GCGTCCAAAT CGTCGGTAAC AACGGCAACC CAGGTTCTGC GTTTCCGTTG ATGGCTTGCC AAGGAGATTG CGATGTTGAC GATGACTGTG CGGGAACGCT TGAGTGCTTC CAGCGAGATG GGGGAGAGGC TGTGCCGGGA TGTGGTGGTG GCGAGCTTGA TTCGAGCCGC ACCGACTATT GCTACGATCC TGCTGGCGGA CCTACGCCGG CCACGCCAAC CGTTTCCCCT GCTACCCAAC CAACTGATAC CCCCGTTACT CAACCGACCG ACGGCCCTCC AGTGGCTATC GTCGGTAACA ACGGCAACCC AGGTTCTGCG TTTCCGTTGA TGGCTTGCCA AGGTGACTGC GATGTAGACG GTGACTGTGC GGGAACGCTT GAGTGCTTCC AGCGAGATGG GGGAGAGGCT GTGCCGGGAT GTGGTGGTGG CGAGCTTGAT TCGAGCCGCA CCGACTATTG CTATGATCCC ACTGGCGGAC CCACGCCGGC CACGCCAACC GTTTCCCCTG CTGCCCAACC GACGGATACC CCTGCTGCCC AACCAACTGA TACCCCCGTT ACTCAACCGA CCGACGGCCC TCCAGTGGCT ATCGTCGGCA ACAACGGCAG CCCGAGTTCC GTATTCCCCT TGTTGGCGTG CCAAGGTGAC TGCGATGTAG ACAGTGACTG TGCGGGAACG CTTGAGTGCT TCCAGCGAGA TGGGGGAGAG GCTGTGCCGG GATGTGGTGG TGGCGAGCTT GATTCGAGCC GCACCGACTA TTGCTATGAT CCCACTGGCG GACCTACGCC GGCCACGCCA ACCGTTTCCC CTGCTGCCCA ACCGACTGAT ACCCCTGTTG CCGATCCGTC GCCTACCCCT GCTGCCCAAC CGACTGATAC CCCCGTTGCC GATCCGTCGC CTACCCCTGT TGCTGATCCG TCGCCTACCC CTGTTGCCGA TCCCTCACCT ACCCCTGTTT CCGATCCGTC GCCTTCCCCT GTTGCCGATG CCTCTCCTTC CCCTGTTGCC GATGCCTCGC CTTCCCCTGT TGGAACGGCT GTCTCAGGGA GAGAAACAAT CAACATTGGC CCTTAAACTG AAACAGCGAC AATTGTGCAG TCCACAATGA AAACACTTCC GCGTGGTCGT CCTTTACTGA CCCTTTGCAC TTTCGGGAAA TTTCTTTTCA GCGGCCGAGG CTGCAAATAG TAGATATAAC AAGTGACACA ATGGAGAGCA GGCCGCGTAA CGCTTCCAAA CTTCTAAAGA TTTATAGAAA ACGCGTTGCT CTTTCCTTGT CGATGACTGG TGCAGAAGAA TGCTACCGTT AGACTATAGA CGCTGTATTT CTCCCTAGCT AGAGTACGAG AAAACTTGGC TCGGATTTTG CGAGCCAATT GTGGAGGCTA TGCTGCGTTT CCACCAGAAC CAAAGCGAGT CTACGAGTTT AAGGCGGTGA AGATAAACTC GTTCTATTTT GGCGTAACAA TAGGACTATG TCCTCTCGGT TGGACACCAC CGAGGGTCGC CATCAAATCC GAATCTGTAA GGAATCGCAA CAAAACGAAG AGTGCCCGTT CGTGAGTATT CGGCTACTGG CTACGAGACG CCTTAGTCCT CTACGAGATC TTGCCATCAC AACCGCCCGT AATCCGGTTG AGAAAGTACG GTGCTACGGT GCCGGACTTT AACATTTGCA ATTGTAGCAC ACAGGCACAG CCTAATACCG AGCGACGAAA CGGTACGCCA GCGGCTGTTG TAAGCATGCG GGCAGAAGTG TCCTAAGACT TCCACTAAAC GGCCAAAACA CCAGTCAACA CTGTGTGTTG GGTTGACATT CCAATCATTA TCCATTGTTC TTGGGCTTCT CAAACCAACG CTCAAGATCG GAAAACTCGA GCGCCGGTAG AAATCCACCC CATCTCCAGT TCAAACACGA GGAGACAGTA CGTACGCATA ATTTCAACGG GAGCAGGCCC CGGTACGGCA CTAGAGGTAG CTAGCGGTAA CAGTGTAAGT CTGTTCTGTA TGGAATGTAC GGTAAAAATG GACCTACGTA TCCACTACGG GGTGGGATTA ACAGATTGCC AACAAGACAA GGGTACAGAA ATGTTTTGGC CCTTCGTGAG GGGCAACATC GAATCCCGAT TGTGACTCAA TCGGGCATTC CCACGTCAGG AGGGGGGGAA CGCTCGCTTG GGTAAGGCTA GCAATACACA TACTACGTGC CGGCATGGGC AACTTAATAG ACGTGATTTG GGGATAGCGC TCCGTGGTTC AATTCCATGG CACGTTAATT TCGACATGGT AACGTCCATG AGTTCGATAC CCGATTTGAA AAAGTTTGAT TTGTCGACAC CTTACTCGGG TGGATAAAGA AAGGAGGGGA AGGGGTCATC TCCAGAGTGG GGAGGATGGC TCAAGGGCCA AGGAATATCA AGCAGAGAAG ATGTCAAGAT ATAAGTGAAT ATGCTTAATA TACCTTAAAT GTGACGAGGT GATAAGACGT GACTTGGGGA GAGCGCTCCG TGGTTCAATT CCATGGCACG TTAATTTTGA CAAAAAGACA AAAGAGTAAA GAAGTGTTTT GGCCCTTCAG AGGGGCAAAA TCGAATCCCG ATTGTGACTC CATCGGGCAT TCCCCCCGTC AGGAGGGGGG AACGCTCGCT TGGGTAAGGC TAGCGATACA ACAACTATTC CTTCCGTGGA TGACTTTTTC CCTTATCACT ATCAACTAGA AGAGTACGAA TATATGGATA TGTGAACGAC CTTTCTGAGG TCTCTGGGTG GAGTTGCTGA TTTCCCTTAT ATAACGGACA CCAAGAACAA CATTTTTATA TCTTCGGCCT GGCCCTGCCA GTACCGTATG ATTTTCATAT CGATATCAAG GATGACAGCC GGTTGCACAC AGCATTTCTC GGTCTGTTAT ATTTACCAGC GAAGGCAAGC TTATAGATTG TCAACTTTAC CCAAATATCT TGTTCCAAAA TACAAAAGCA GCTGACTTGC ACTTAAAAAA ATACTACGTT TCCAATGAAG TTCACATTCC CCTCTCTCCA CCTTGGATTG ACTCTCATTT CCTTGGAAAT CCGAGAATTT GATGCTGCGA GAACTGAATT GACCTCGTTT ACAACGAAAC TTCGTGGTCG GGTGTTGAAG CAAAAGGTAC AAGTCGTCGG CAACAACGGT AACCCAGGTT CTGCGTTTCC GTTGATTGCT TGCCAAGGAG ATTGCGATGT TAACGACGAC TGCAAAGGAA TGCTTGAGTG CTTTCATCGG GATGGCGGAG AGGCTGTGCC CGGATGTGGC GGCGGAGAGC TTGATTCAAG CCGCACCGAC TTCTGCTATG ATCCCACTGG CGGACCTACG CCGGTCACGC CAACCGCTTC CCCTGCTACC CAACTAACTG ATACCCCTGT TGCCCAACCA ACCGTTGCTC AACCAACCGC CGGCCCTCCA GTGACTTTTG TCGGGAACAA CGGCGGCCCG AGTTCTGTAT TCCCGTTGAT GGCTTGCCAA GGTGACTGCG ATGTTGACGA CGACTGCGAA GGAATGCTCG AATGTTTCCA GCGAGATGGC GGAGAGGCTG TGCCCGGATG TGGCGGCGGA GAGCTTGATT CAAGCCGCAC CGACTACTGC TATGATCCCA CTGGCGGACC TACGCCGGTC ACGCCAACCG CTTCCCCTGC TACCCAACTA ACTGATACCC CTGTTATCCA ACCAACCGTT GCTCAACCAA CCGCCGGCCC TCCAGTGACT TTTGTCGGGA ACAACGGCGG CCCGAGTTCT GTATTCCCGT TGATGGCTTG CCAAGGCGAC TGCGATGTTG ACGACGACTG CGAAGGAATG CTCGAATGTT TCCAGCGAGA TGGTGGAGAG GCCGTGCCCG GATGTGGCGG CGGCGAGCTT GATTCGAGCC GCACCGACTA CTGTTTCGAT CCCGCTGGCG GACCTACGCC AGTTACGCCA ACCGCTTCCC CTGTTGCCGA TCTGTCGCCT TCCCCTGCTA CCAATCTGTC GCCTTCCCCT GCTGTCGATC TGTCGCCTTC TCCTGTTGCC GATCTGTCGC CTACCCCTGT TGCCGATCTG TCGCCTACCC CTGTTGCCGA TCCGTCGCCT TCCCCTGTTG CCGA
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Protein sequence | MCGGELDSSR TDFCYDPTGG PTPVTPTASP ATQLTDTPVA QPTVAQPTAG PPVTFVGNNG GPSSVFPLMA CQGDCDVDDD CEGMLECFQR DGGEAVPGCG GGELDSSRTD YCYDPTGGPT PVTPTASPAT QLTDTPVIQP TVAQPTAGPP VTFVGNNGGP SSVFPLMACQ GDCDVDDDCE GMLECFQRDG GEAVPGCGGG ELDSSRTDYC FDPAGGPTPV TPTASPVADL SPSPATNLSP SPAVDLSPSP VADLSPTPVA DLSPTPVADP SPSPVA
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