| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_48566 |
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| Symbol | |
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| ID | 7194792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011686 |
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| Strand | - |
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| Start bp | 229192 |
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| End bp | 230582 |
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| Gene Length | 1391 bp |
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| Protein Length | 460 aa |
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| Translation table | |
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| GC content | 46% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183183 |
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| Protein GI | 219125847 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00129954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | CCTGGACCAT GAAAAGGCGG AATGTTTGCT TCTCCTTTTC TTTGCTTGGT CTAGTCCTGG
TTTCAATGTT GATTGTTAGA CAACACCGCC ATTACGTCAA ACAAGCTGCT TCCGGTAAGC
TCTTGTCGAA ACGAGGAGGC GACAGGCCTC ATCACTTCAA TGTCTCTCAT TTGCCAAATG
CAAATCGATC GGGTGCTAGA CAATCAAGGA CGAACACGAT TCAGCTTTAC CATGACCACG
CTCCTAACTC GCGAACTGTT TTACTTCCGG CTGTACCGAG CTCCACATCA GAGGAGAGGG
TGCGCTTCGC CATCGGAAAT TATTCGGATG CCTCGAATCC ACTCATCAAC TGTAATATCA
CATCACAGGT CCTTTTGCAC ACGGACCAAA TGCCCTGGAT AATGGAAAGT CTCGATAGCA
CAGGATCGAA AAAGACGGTC GGAGGTGACG AATTCTACGT TGTCTATAAA GATTCTAATG
AAGAGTGGGA TGCAACCGCT GTGGCATGGA TTCAAGACCT GCACAATGGT TCATATGGGC
TTGATTTCGT AACCGTACCT ATCAAAGAAA CCTTCAGTAA TTTGACGGGC CATGGAAATT
TGACCATATA CTTCCAGTAT TCGTGTGGTA TCGGGTTTAC CCCACAACCT CTAAAAGACA
ACTGGAAAGA CAACGGATCC ACCTGTTTGG AAACAACCGC GCATGTTAAG GCCCCTAGGA
TTCGAGTTTT CCAGGCTCCA ACTATATCTC CTAATTTCTC CGAGTTTTCT AGAATGGTAT
CCTTCGGAGA CTCACTTTTA CAGCAGCTTG TATTCGGATA TACAAGATTC TTTCGAAAAG
ATGTGTTTTG GAAGGCCAAT GTCAATTCGG AGCTTACAAG CGAAACACTC GACAAGCGTT
TCATACCTAA GCTTCGTGAG TGGCACGGCG GCGATCTGCA AGACCCCACC GTGGGCCTTG
TAATTGGGTC TTCTGTTTGG GACATTCTTC AAAATCAGAA TATTCAGAAG GCTGATTTTC
GGGATCACTT ACAAGCTTGT CGGCTGTATA TTGCCCGTGT TCAAAAAGAA TTTCCCAATA
CGACAGTTTT TTGGAAATCG CCTTCTACCT TGCATGTACA TAGAATGCTT CCAGGATGTA
ACAAAGATCG GAGGTGCGCA GAGAGAGTGC GTTACATGAG TGCTTCCCGA TCTGAATTTC
TGTATCGTGG ACAAAAACAA ATAATGGCCG AGCTGCGCAT CCCCTTTCTG GATCTCTATG
AAGGATATTT CCTGTCGGCG CCTTACACGG TGCGCGGTGA CGGACGTCAC TATCAACCCA
AATATGACCG TCGAATGTTG CGCTGGCTGT ACAGCAATAA GACTGTGACT CCCAGCATAT
TTCTGGAGTG A
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| Protein sequence | MKRRNVCFSF SLLGLVLVSM LIVRQHRHYV KQAASGKLLS KRGGDRPHHF NVSHLPNANR
SGARQSRTNT IQLYHDHAPN SRTVLLPAVP SSTSEERVRF AIGNYSDASN PLINCNITSQ
VLLHTDQMPW IMESLDSTGS KKTVGGDEFY VVYKDSNEEW DATAVAWIQD LHNGSYGLDF
VTVPIKETFS NLTGHGNLTI YFQYSCGIGF TPQPLKDNWK DNGSTCLETT AHVKAPRIRV
FQAPTISPNF SEFSRMVSFG DSLLQQLVFG YTRFFRKDVF WKANVNSELT SETLDKRFIP
KLREWHGGDL QDPTVGLVIG SSVWDILQNQ NIQKADFRDH LQACRLYIAR VQKEFPNTTV
FWKSPSTLHV HRMLPGCNKD RRCAERVRYM SASRSEFLYR GQKQIMAELR IPFLDLYEGY
FLSAPYTVRG DGRHYQPKYD RRMLRWLYSN KTVTPSIFLE
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