Gene PHATRDRAFT_48539 details

Gene Information

• Locus tag: PHATRDRAFT_48539
• Symbol: Trx-h2
• ID: 7194714
• Type: CDS
• Is gene spliced: Yes
• Is pseudo gene: No
• Organism name: Phaeodactylum tricornutum CCAP 1055/1
• Kingdom: Eukaryota
• Replicon accession: NC_011686
• Strand: +
• Start bp: 155396
• End bp: 156112
• Gene Length: 717 bp
• Protein Length: 165 aa
• GC content: 51%
• Product: thioredoxin h
• Protein accession: XP_002183039
• Protein GI: 219125548

Plasmid Coverage information

• Num covering plasmid clones: 34
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TCCCAAATAT TCTCTTTCTC GCGGTTCCCC CGCATAGACC TAAGGACAAT CAAGATGCGC 
TCATACCTTC TAGTAGCAGC TGTTATGCTG TACGGAACCT TTATGACGGG AGATGCCGTT 
CAAGGACCCG CCCCCGCAAC GAAAGCTCCC TCCAGTTGTG CAGCGGTGGA CGACACCACT 
TTGTTCGGCG TCGTACAGCG AGTACCGGCG CTCTCGGTAC GAGGTGGACA AGTCCACGAA 
CCGGAGAGCT TGGCAGATGT CGATGCGCTT GTCCTGAAAG CGGGATCGGA AGGAAAGCTG 
GTGGTCATTG ATTTCTCGGC TACCTGGTGC GGTCCCTGCA AGATGATTGC TCCGCTCGTA 
AGTCCAGGCT GAGATCGATG AAGATTAGGC TGAGTCAAAC AGGCAACGAG TCATTCCTTT 
TTCAATTGGA TTGCTAATCT CGTTCGGGAC ACTCCAGCAC CTACTCACGC TATCTTTCCA 
TGTTTCTTTC TACAGTTCCA ACAGTTATCG GAAGCGATTC CCGGGGTGGT CTTTATCAAA 
ATTGACGTCG ACGAGAACCC CGACACGGCT GCCAAATATA ACGTGTCGGC CATGCCAACC 
TTTGTGTTTC TTAAAAGCGG TGAAGTTATT GATCGTCTAA TGGGAGCGAA TCCGGCACGT 
TTGCAGGAAT TGATCGATGA ACACCAGTAA CTAATGTAAG GATATGGATG TGTAGCT 

 

Protein sequence

MRSYLLVAAV MLYGTFMTGD AVQGPAPATK APSSCAAVDD TTLFGVVQRV PALSVRGGQV 
HEPESLADVD ALVLKAGSEG KLVVIDFSAT WCGPCKMIAP LFQQLSEAIP GVVFIKIDVD 
ENPDTAAKYN VSAMPTFVFL KSGEVIDRLM GANPARLQEL IDEHQ