| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39238 |
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| Symbol | |
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| ID | 7194690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011686 |
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| Strand | - |
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| Start bp | 689551 |
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| End bp | 691326 |
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| Gene Length | 1776 bp |
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| Protein Length | 591 aa |
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| Translation table | |
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| GC content | 49% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002183268 |
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| Protein GI | 219126026 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.975604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGTCTGC TGTCTGCACT CGAACACAAC ACTGTTGTGA AAACTCTAGA TCTTTGGCTG
CCTGGCAAAG ACACGGCTCC TTCTTCCAAT AAAGACAGCG ATATCAACTA TTCCATTCTG
AGTCGGATAT TGGAGCAGAA CAAAACCCTT CAACGCCTCG TCGTCACGTC TTGGAGCAGC
GATAGCGACT ATGCTGCATG GCAAGCTCTC GTAGAAGGTC TCCGCCGGAA TGTGTCAATA
CAATCAGTAG AGCTTGGAGA TGCCGTCCAC GAAACAAGCA GTAGTACGGA CTACCAGGAC
GTCGTGATGA TCCATTGCGA TGAGCAGGAG GATTCAAAGT TTGGAAATGA TGAGTTGGGG
GATTTAGAAA TGATCATGGT CAGTGGAAAA CTAAAAGCAC TGACTCTGAA AGGACTCACA
CTGAGTCCAA CTGCTGCAGA GCGCCTTGCC AATGGCATTT CGCAATCCTC TTCGCTTTTC
ATGTTGGAAT GCATGCAAGT TTCAATGGAT CGGGGATCAT GGGGTACAGT CTTGGAATCT
TGCAGAAATG GTACACTTTC TGAAATTCAC ATCGCTCAGT GTGACTTGGG GTTTTCAGCA
ACGACAATGA TATCCTGTGC GCAGCCTTCT GACGAACACC CGCTTTCCGC CTTGTTACGG
AAAAACTCAA GTCTTCGTGT CTTGCGGGTA ATTTCCAGCC AATTTGGAGT GGCTGAGCTA
CGCGCTGTCA CCGATGCTGG CCAGCTCTTC TTGAAGCAAT TGGAGCTCCG TGACCACGAG
TTGACGGGAT GCGGTGGGCT ACTAGCTCAC ATTGCTCAAC AAGCTAGTAG CCTGGAACAT
TTGTCTCTGT CCGACACTGG CCTTGGAAAT GGCGATTTGA TAGAACTGTG TAGAGGGCTG
TACCTACACG CTTCTCTGAG CTCGCTCAAT ATCCAAAACA ACAATTTCTG CTCAGTTCTA
GCTGCCCAAA TGCTTGCGCA TACGATATCA TCTCTCACCA GAATCGAGTC TTTGGATATT
TCTGAATGCC CTTGGGGTGA CGAAGGAGTT TCTGTCCTGA GGACAACGAT CGCCTCACAT
ACTTCCTTGC GCAAACTCCA CTTGGCGGAC ATCAGAATGA CCGACTGCGG CTTTGTTGAC
TTATGTAGCA GCTTGTTGAA CAATGCTTCA TTGGGCGTCC TGGACGTGAG TAGGAACAGA
TTGGGAACAT CAGGTATGCA TGCCGTTGCA GACTTGCTAT CTCGATCTAA AACTACCATC
TACGATTTGA ATTTGTCCAA TTGCCACCTC ACAGACCACG GAGTGGAAAC TTTGGGGCGC
TCTTTGTCCA GCGCTAAATC GCTGGTCCGC TTGTCGCTGG CATCTAATTC GGCTGGTAAT
GACGCTTGCC GTGCAATAGC AAGTTCGTTG CCCCATTCTT CTTTGGCCTG CTTGGAGCTC
CAATTCAATC GCTTTGACGA AGAAGGCCTG GGCCATCTAG TGGAGGCACT ACAGCATAGT
GTCGATTTGC ACGACTTATT TGTATGGAAT GCTTGTGTAT TTACTGGAGG AGTAGTGTCA
AAACAACAGC AATCCAAACT ACAATTCCTG TCGGAAGCCA TGTTGCATTG GCTGAGACTC
AACAGAGCTG GGCGAGGCGT GATCCGAAAC TACAGCAATC TTCTATGGGA GATCTTACCG
ATCATTTTGC ACCGAGCTGG CCAGTTGTAC GGACCGGACG CATTGTTCCA CATGCTGCAA
GCCCGTCCAG AGCTCGTGCT TCAAAGTAAG CGCTGA
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| Protein sequence | MCLLSALEHN TVVKTLDLWL PGKDTAPSSN KDSDINYSIL SRILEQNKTL QRLVVTSWSS
DSDYAAWQAL VEGLRRNVSI QSVELGDAVH ETSSSTDYQD VVMIHCDEQE DSKFGNDELG
DLEMIMVSGK LKALTLKGLT LSPTAAERLA NGISQSSSLF MLECMQVSMD RGSWGTVLES
CRNGTLSEIH IAQCDLGFSA TTMISCAQPS DEHPLSALLR KNSSLRVLRV ISSQFGVAEL
RAVTDAGQLF LKQLELRDHE LTGCGGLLAH IAQQASSLEH LSLSDTGLGN GDLIELCRGL
YLHASLSSLN IQNNNFCSVL AAQMLAHTIS SLTRIESLDI SECPWGDEGV SVLRTTIASH
TSLRKLHLAD IRMTDCGFVD LCSSLLNNAS LGVLDVSRNR LGTSGMHAVA DLLSRSKTTI
YDLNLSNCHL TDHGVETLGR SLSSAKSLVR LSLASNSAGN DACRAIASSL PHSSLACLEL
QFNRFDEEGL GHLVEALQHS VDLHDLFVWN ACVFTGGVVS KQQQSKLQFL SEAMLHWLRL
NRAGRGVIRN YSNLLWEILP IILHRAGQLY GPDALFHMLQ ARPELVLQSK R
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