| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_39174 |
|---|
| Symbol | |
|---|
| ID | 7194852 |
|---|
| Type | CDS |
|---|
| Is gene spliced | Yes |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
|---|
| Kingdom | Eukaryota |
|---|
| Replicon accession | NC_011686 |
|---|
| Strand | - |
|---|
| Start bp | 498834 |
|---|
| End bp | 499858 |
|---|
| Gene Length | 1025 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | predicted protein |
|---|
| Protein accession | XP_002183234 |
|---|
| Protein GI | 219125955 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGA TCCGTCACGA AGAATCGGAG AGGATGCCGA TGACGTTGGT ACCGAACAGG
CCTCTCCCCG AAGCAAGCTT CGATGCCTTT GACGGTGTAA TCTGTCGGGG CAGGCAGGAA
GGCATGCACA CATACGCCTA CTACATACCC ATGGGGCTCA CTCACTGTCA CCCACAGTCA
ACCCTTCCGT CTAGGAAGGC ACGTTTGCAC TACTCTTTCG AATGCGGTCC TACTCTCCAA
CAGTAAAAGC AGTAGTGTTG GGATACTACA GTACACTGCT GTGTACCCGA CCTGGATCGG
GAGAAGCGTT CGCTTTTCGT TCCGATCGGT CGCGACGATC CATCCGTTCC CAACATTGCT
CGTGGACGCA TCCTCCCGAA GTCTTTCGAT CCCCGTCCTT GTATTTAAAG GATCAGCGAG
ACGATGAGGA AGACGACAAT CAACGGAAAC CATCCAACGC CACACCAGAA CCCGTCAACG
ACGTTCTTTC CCGATTTACC GCTCCCCGAA TCGACGACCC ATTCCTACCC TTATCCGACG
TCCTCGTCGC GCAAATCATC GCTCCGAGTC TACAGATCGC CTGGTTGAGT CTCAATCACG
CACCGTCACC TTCCTGGCTC CAACCCATAT TCGCCACCTC CACACTCTAC AGCAGTCGCG
GGAGTCTGAT CGCTCCCACA CTCATTCACG GCGCCGCACT GGCCTCGTGT TGGATCGTGG
GAGCCCTGGC GGCCCGCGCC TACCAACAAG ACGCGATCGC GGCCGACGCC GACGGTAAAC
TGGGCACCGT GCTCGCGCGA GTCGTACAGG CCGGGGCCTT TGCCACGGGA ATACTGATCC
TGGCCACCCA AACGGATCTC TTTCTCGAAT ACGGACGCTG GGTTCAAGTC GGCGAAACGG
AAGAAATTGA TTTTCGACTC CTCGTGGCAC TGGTGGAACT CAGTAACGAC GTTTTTTTCG
AAGCGACCAC TATGGTTACC TGGAGACTGT ATCTGGCCTG GCAAAGCGTG CGGCGGCAGC
GATAG
|
|---|
| Protein sequence | MDPIRHEESE RMPMTLVPNR PLPEASFDAF DVKAVVLGYY STLLCTRPGS GEAFAFRSDR
SRRSIRSQHC SWTHPPEVFR SPSLYLKDQR DDEEDDNQRK PSNATPEPVN DVLSRFTAPR
IDDPFLPLSD VLVAQIIAPS LQIAWLSLNH APSPSWLQPI FATSTLYSSR GSLIAPTLIH
GAALASCWIV GALAARAYQQ DAIAADADGK LGTVLARVVQ AGAFATGILI LATQTDLFLE
YGRWVQVGET EEIDFRLLVA LVELSNDVFF EATTMVTWRL YLAWQSVRRQ R
|
|---|
| |